R01 MH102416/MH/NIMH NIH HHS/United States[Grants and Funding] - Search Results

Year	Number of Results
2014	1
2015	2
2016	4
2017	1
2018	5
2019	1
2020	1
2024	0

1

Basset: learning the regulatory code of the accessible genome with deep convolutional neural networks.

Kelley DR, Snoek J, Rinn JL. Kelley DR, et al. Genome Res. 2016 Jul;26(7):990-9. doi: 10.1101/gr.200535.115. Epub 2016 May 3. Genome Res. 2016. PMID: 27197224 Free PMC article.

2

Long Noncoding RNAs: Molecular Modalities to Organismal Functions.

Rinn JL, Chang HY. Rinn JL, et al. Annu Rev Biochem. 2020 Jun 20;89:283-308. doi: 10.1146/annurev-biochem-062917-012708. Annu Rev Biochem. 2020. PMID: 32569523 Review.

3

Chromatin environment, transcriptional regulation, and splicing distinguish lincRNAs and mRNAs.

Melé M, Mattioli K, Mallard W, Shechner DM, Gerhardinger C, Rinn JL. Melé M, et al. Genome Res. 2017 Jan;27(1):27-37. doi: 10.1101/gr.214205.116. Epub 2016 Dec 7. Genome Res. 2017. PMID: 27927715 Free PMC article.

4

Function and evolution of local repeats in the Firre locus.

Hacisuleyman E, Shukla CJ, Weiner CL, Rinn JL. Hacisuleyman E, et al. Nat Commun. 2016 Mar 24;7:11021. doi: 10.1038/ncomms11021. Nat Commun. 2016. PMID: 27009974 Free PMC article.

5

Inter-chromosomal Contact Properties in Live-Cell Imaging and in Hi-C.

Maass PG, Barutcu AR, Weiner CL, Rinn JL. Maass PG, et al. Mol Cell. 2018 Mar 15;69(6):1039-1045.e3. doi: 10.1016/j.molcel.2018.02.007. Epub 2018 Mar 8. Mol Cell. 2018. PMID: 29526697 Free PMC article.

6

Spatiotemporal allele organization by allele-specific CRISPR live-cell imaging (SNP-CLING).

Maass PG, Barutcu AR, Shechner DM, Weiner CL, Melé M, Rinn JL. Maass PG, et al. Nat Struct Mol Biol. 2018 Feb;25(2):176-184. doi: 10.1038/s41594-017-0015-3. Epub 2018 Jan 8. Nat Struct Mol Biol. 2018. PMID: 29343869 Free PMC article.

7

High-throughput identification of RNA nuclear enrichment sequences.

Shukla CJ, McCorkindale AL, Gerhardinger C, Korthauer KD, Cabili MN, Shechner DM, Irizarry RA, Maass PG, Rinn JL. Shukla CJ, et al. EMBO J. 2018 Mar 15;37(6):e98452. doi: 10.15252/embj.201798452. Epub 2018 Jan 15. EMBO J. 2018. PMID: 29335281 Free PMC article.

8

Enhancers in the Peril lincRNA locus regulate distant but not local genes.

Groff AF, Barutcu AR, Lewandowski JP, Rinn JL. Groff AF, et al. Genome Biol. 2018 Dec 11;19(1):219. doi: 10.1186/s13059-018-1589-8. Genome Biol. 2018. PMID: 30537984 Free PMC article.

9

In Vivo Characterization of Linc-p21 Reveals Functional cis-Regulatory DNA Elements.

Groff AF, Sanchez-Gomez DB, Soruco MML, Gerhardinger C, Barutcu AR, Li E, Elcavage L, Plana O, Sanchez LV, Lee JC, Sauvageau M, Rinn JL. Groff AF, et al. Cell Rep. 2016 Aug 23;16(8):2178-2186. doi: 10.1016/j.celrep.2016.07.050. Epub 2016 Aug 11. Cell Rep. 2016. PMID: 27524623 Free PMC article.

10

Spatiotemporal expression and transcriptional perturbations by long noncoding RNAs in the mouse brain.

Goff LA, Groff AF, Sauvageau M, Trayes-Gibson Z, Sanchez-Gomez DB, Morse M, Martin RD, Elcavage LE, Liapis SC, Gonzalez-Celeiro M, Plana O, Li E, Gerhardinger C, Tomassy GS, Arlotta P, Rinn JL. Goff LA, et al. Proc Natl Acad Sci U S A. 2015 Jun 2;112(22):6855-62. doi: 10.1073/pnas.1411263112. Proc Natl Acad Sci U S A. 2015. PMID: 26034286 Free PMC article.

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