R35 GM130322/GM/NIGMS NIH HHS/United States[Grants and Funding] - Search Results

Year	Number of Results
2019	3
2020	3
2021	2
2022	4
2023	4
2024	2

1

S1-END-seq reveals DNA secondary structures in human cells.

Matos-Rodrigues G, van Wietmarschen N, Wu W, Tripathi V, Koussa NC, Pavani R, Nathan WJ, Callen E, Belinky F, Mohammed A, Napierala M, Usdin K, Ansari AZ, Mirkin SM, Nussenzweig A. Matos-Rodrigues G, et al. Mol Cell. 2022 Oct 6;82(19):3538-3552.e5. doi: 10.1016/j.molcel.2022.08.007. Epub 2022 Sep 7. Mol Cell. 2022. PMID: 36075220 Free PMC article.

2

Detection of alternative DNA structures and its implications for human disease.

Matos-Rodrigues G, Hisey JA, Nussenzweig A, Mirkin SM. Matos-Rodrigues G, et al. Mol Cell. 2023 Oct 19;83(20):3622-3641. doi: 10.1016/j.molcel.2023.08.018. Mol Cell. 2023. PMID: 37863029 Review.

3

Replication dependent and independent mechanisms of GAA repeat instability.

Masnovo C, Lobo AF, Mirkin SM. Masnovo C, et al. DNA Repair (Amst). 2022 Oct;118:103385. doi: 10.1016/j.dnarep.2022.103385. Epub 2022 Aug 3. DNA Repair (Amst). 2022. PMID: 35952488 Free PMC article. Review.

4

On the wrong DNA track: Molecular mechanisms of repeat-mediated genome instability.

Khristich AN, Mirkin SM. Khristich AN, et al. J Biol Chem. 2020 Mar 27;295(13):4134-4170. doi: 10.1074/jbc.REV119.007678. Epub 2020 Feb 14. J Biol Chem. 2020. PMID: 32060097 Free PMC article. Review.

5

At the Beginning of the End and in the Middle of the Beginning: Structure and Maintenance of Telomeric DNA Repeats and Interstitial Telomeric Sequences.

Aksenova AY, Mirkin SM. Aksenova AY, et al. Genes (Basel). 2019 Feb 5;10(2):118. doi: 10.3390/genes10020118. Genes (Basel). 2019. PMID: 30764567 Free PMC article. Review.

6

Replication-independent instability of Friedreich's ataxia GAA repeats during chronological aging.

Neil AJ, Hisey JA, Quasem I, McGinty RJ, Hitczenko M, Khristich AN, Mirkin SM. Neil AJ, et al. Proc Natl Acad Sci U S A. 2021 Feb 2;118(5):e2013080118. doi: 10.1073/pnas.2013080118. Proc Natl Acad Sci U S A. 2021. PMID: 33495349 Free PMC article.

7

Large-scale expansions of Friedreich's ataxia GAA•TTC repeats in an experimental human system: role of DNA replication and prevention by LNA-DNA oligonucleotides and PNA oligomers.

Rastokina A, Cebrián J, Mozafari N, Mandel NH, Smith CIE, Lopes M, Zain R, Mirkin SM. Rastokina A, et al. Nucleic Acids Res. 2023 Sep 8;51(16):8532-8549. doi: 10.1093/nar/gkad441. Nucleic Acids Res. 2023. PMID: 37216608 Free PMC article.

8

Guidelines for DNA recombination and repair studies: Cellular assays of DNA repair pathways.

Klein HL, Bačinskaja G, Che J, Cheblal A, Elango R, Epshtein A, Fitzgerald DM, Gómez-González B, Khan SR, Kumar S, Leland BA, Marie L, Mei Q, Miné-Hattab J, Piotrowska A, Polleys EJ, Putnam CD, Radchenko EA, Saada AA, Sakofsky CJ, Shim EY, Stracy M, Xia J, Yan Z, Yin Y, Aguilera A, Argueso JL, Freudenreich CH, Gasser SM, Gordenin DA, Haber JE, Ira G, Jinks-Robertson S, King MC, Kolodner RD, Kuzminov A, Lambert SA, Lee SE, Miller KM, Mirkin SM, Petes TD, Rosenberg SM, Rothstein R, Symington LS, Zawadzki P, Kim N, Lisby M, Malkova A. Klein HL, et al. Microb Cell. 2019 Jan 7;6(1):1-64. doi: 10.15698/mic2019.01.664. Microb Cell. 2019. PMID: 30652105 Free PMC article. Review.

9

Pathogenic CANVAS (AAGGG)_n repeats stall DNA replication due to the formation of alternative DNA structures.

Hisey JA, Radchenko EA, Ceschi S, Rastokina A, Mandel NH, McGinty RJ, Matos-Rodrigues G, Hernandez A, Nussenzweig A, Mirkin SM. Hisey JA, et al. bioRxiv [Preprint]. 2023 Jul 26:2023.07.25.550509. doi: 10.1101/2023.07.25.550509. bioRxiv. 2023. PMID: 37546920 Free PMC article. Updated. Preprint.

10

Mrc1 and Tof1 prevent fragility and instability at long CAG repeats by their fork stabilizing function.

Gellon L, Kaushal S, Cebrián J, Lahiri M, Mirkin SM, Freudenreich CH. Gellon L, et al. Nucleic Acids Res. 2019 Jan 25;47(2):794-805. doi: 10.1093/nar/gky1195. Nucleic Acids Res. 2019. PMID: 30476303 Free PMC article.

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