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Pseudogenes in the ENCODE regions: consensus annotation, analysis of transcription, and evolution.
Genome Res. 2007 Jun;17(6):839-51. doi: 10.1101/gr.5586307.
Genome Res. 2007.
PMID: 17568002
Free PMC article.
Structured RNAs in the ENCODE selected regions of the human genome.
Washietl S, Pedersen JS, Korbel JO, Stocsits C, Gruber AR, Hackermüller J, Hertel J, Lindemeyer M, Reiche K, Tanzer A, Ucla C, Wyss C, Antonarakis SE, Denoeud F, Lagarde J, Drenkow J, Kapranov P, Gingeras TR, Guigó R, Snyder M, Gerstein MB, Reymond A, Hofacker IL, Stadler PF.
Washietl S, et al.
Genome Res. 2007 Jun;17(6):852-64. doi: 10.1101/gr.5650707.
Genome Res. 2007.
PMID: 17568003
Free PMC article.
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Prominent use of distal 5' transcription start sites and discovery of a large number of additional exons in ENCODE regions.
Denoeud F, Kapranov P, Ucla C, Frankish A, Castelo R, Drenkow J, Lagarde J, Alioto T, Manzano C, Chrast J, Dike S, Wyss C, Henrichsen CN, Holroyd N, Dickson MC, Taylor R, Hance Z, Foissac S, Myers RM, Rogers J, Hubbard T, Harrow J, Guigó R, Gingeras TR, Antonarakis SE, Reymond A.
Denoeud F, et al.
Genome Res. 2007 Jun;17(6):746-59. doi: 10.1101/gr.5660607.
Genome Res. 2007.
PMID: 17567994
Free PMC article.
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