Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation

Search Page

Filters

My NCBI Filters

Text availability

Article attribute

Article type

Publication date

Search Results

346 results

Filters applied: . Clear all
Results are displayed in a computed author sort order. The Results By Year timeline is not available.
Page 1
Pathway and network analysis of cancer genomes.
Creixell P, Reimand J, Haider S, Wu G, Shibata T, Vazquez M, Mustonen V, Gonzalez-Perez A, Pearson J, Sander C, Raphael BJ, Marks DS, Ouellette BFF, Valencia A, Bader GD, Boutros PC, Stuart JM, Linding R, Lopez-Bigas N, Stein LD; Mutation Consequences and Pathway Analysis Working Group of the International Cancer Genome Consortium. Creixell P, et al. Among authors: bader gd. Nat Methods. 2015 Jul;12(7):615-621. doi: 10.1038/nmeth.3440. Nat Methods. 2015. PMID: 26125594 Free PMC article.
BIND--The Biomolecular Interaction Network Database.
Bader GD, Donaldson I, Wolting C, Ouellette BF, Pawson T, Hogue CW. Bader GD, et al. Nucleic Acids Res. 2001 Jan 1;29(1):242-5. doi: 10.1093/nar/29.1.242. Nucleic Acids Res. 2001. PMID: 11125103 Free PMC article.
The HUPO PSI's molecular interaction format--a community standard for the representation of protein interaction data.
Hermjakob H, Montecchi-Palazzi L, Bader G, Wojcik J, Salwinski L, Ceol A, Moore S, Orchard S, Sarkans U, von Mering C, Roechert B, Poux S, Jung E, Mersch H, Kersey P, Lappe M, Li Y, Zeng R, Rana D, Nikolski M, Husi H, Brun C, Shanker K, Grant SG, Sander C, Bork P, Zhu W, Pandey A, Brazma A, Jacq B, Vidal M, Sherman D, Legrain P, Cesareni G, Xenarios I, Eisenberg D, Steipe B, Hogue C, Apweiler R. Hermjakob H, et al. Nat Biotechnol. 2004 Feb;22(2):177-83. doi: 10.1038/nbt926. Nat Biotechnol. 2004. PMID: 14755292
Pathway information for systems biology.
Cary MP, Bader GD, Sander C. Cary MP, et al. Among authors: bader gd. FEBS Lett. 2005 Mar 21;579(8):1815-20. doi: 10.1016/j.febslet.2005.02.005. FEBS Lett. 2005. PMID: 15763557 Free article. Review.
Pathguide: a pathway resource list.
Bader GD, Cary MP, Sander C. Bader GD, et al. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D504-6. doi: 10.1093/nar/gkj126. Nucleic Acids Res. 2006. PMID: 16381921 Free PMC article.
Computational prediction of cancer-gene function.
Hu P, Bader G, Wigle DA, Emili A. Hu P, et al. Nat Rev Cancer. 2007 Jan;7(1):23-34. doi: 10.1038/nrc2036. Epub 2006 Dec 14. Nat Rev Cancer. 2007. PMID: 17167517 Review.
Integration of biological networks and gene expression data using Cytoscape.
Cline MS, Smoot M, Cerami E, Kuchinsky A, Landys N, Workman C, Christmas R, Avila-Campilo I, Creech M, Gross B, Hanspers K, Isserlin R, Kelley R, Killcoyne S, Lotia S, Maere S, Morris J, Ono K, Pavlovic V, Pico AR, Vailaya A, Wang PL, Adler A, Conklin BR, Hood L, Kuiper M, Sander C, Schmulevich I, Schwikowski B, Warner GJ, Ideker T, Bader GD. Cline MS, et al. Among authors: bader gd. Nat Protoc. 2007;2(10):2366-82. doi: 10.1038/nprot.2007.324. Nat Protoc. 2007. PMID: 17947979 Free PMC article.
Positive selection of tyrosine loss in metazoan evolution.
Tan CS, Pasculescu A, Lim WA, Pawson T, Bader GD, Linding R. Tan CS, et al. Among authors: bader gd. Science. 2009 Sep 25;325(5948):1686-8. doi: 10.1126/science.1174301. Epub 2009 Jul 9. Science. 2009. PMID: 19589966 Free PMC article.
346 results