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mRNA-Seq whole-transcriptome analysis of a single cell.
Tang F, Barbacioru C, Wang Y, Nordman E, Lee C, Xu N, Wang X, Bodeau J, Tuch BB, Siddiqui A, Lao K, Surani MA. Tang F, et al. Among authors: bodeau j. Nat Methods. 2009 May;6(5):377-82. doi: 10.1038/nmeth.1315. Epub 2009 Apr 6. Nat Methods. 2009. PMID: 19349980
RNA-Seq mapping and detection of gene fusions with a suffix array algorithm.
Sakarya O, Breu H, Radovich M, Chen Y, Wang YN, Barbacioru C, Utiramerur S, Whitley PP, Brockman JP, Vatta P, Zhang Z, Popescu L, Muller MW, Kudlingar V, Garg N, Li CY, Kong BS, Bodeau JP, Nutter RC, Gu J, Bramlett KS, Ichikawa JK, Hyland FC, Siddiqui AS. Sakarya O, et al. Among authors: bodeau jp. PLoS Comput Biol. 2012;8(4):e1002464. doi: 10.1371/journal.pcbi.1002464. Epub 2012 Apr 5. PLoS Comput Biol. 2012. PMID: 22496636 Free PMC article.
Assessing gene expression variation in normal human tissues using GeneTag, a novel, global, sensitive profiling method.
Wong LY, Hafeman A, Boyd VL, Bodeau J, Lazaruk KD, Liew SN, Casey P, Belonogoff V, Bit S, Sumner C, Bredo A, Ho N, Chu E, Olson S, Rabkin S, Maltchenko S, Spier G, Gilbert D, Baumhueter S. Wong LY, et al. Among authors: bodeau j. J Biotechnol. 2003 Mar 20;101(3):199-217. doi: 10.1016/s0168-1656(02)00301-2. J Biotechnol. 2003. PMID: 12615390