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The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models.
Hucka M, Finney A, Sauro HM, Bolouri H, Doyle JC, Kitano H, Arkin AP, Bornstein BJ, Bray D, Cornish-Bowden A, Cuellar AA, Dronov S, Gilles ED, Ginkel M, Gor V, Goryanin II, Hedley WJ, Hodgman TC, Hofmeyr JH, Hunter PJ, Juty NS, Kasberger JL, Kremling A, Kummer U, Le Novère N, Loew LM, Lucio D, Mendes P, Minch E, Mjolsness ED, Nakayama Y, Nelson MR, Nielsen PF, Sakurada T, Schaff JC, Shapiro BE, Shimizu TS, Spence HD, Stelling J, Takahashi K, Tomita M, Wagner J, Wang J; SBML Forum. Hucka M, et al. Among authors: bornstein bj. Bioinformatics. 2003 Mar 1;19(4):524-31. doi: 10.1093/bioinformatics/btg015. Bioinformatics. 2003. PMID: 12611808
SBMLToolbox: an SBML toolbox for MATLAB users.
Keating SM, Bornstein BJ, Finney A, Hucka M. Keating SM, et al. Among authors: bornstein bj. Bioinformatics. 2006 May 15;22(10):1275-7. doi: 10.1093/bioinformatics/btl111. Epub 2006 Mar 30. Bioinformatics. 2006. PMID: 16574696 Free article.
LibSBML: an API library for SBML.
Bornstein BJ, Keating SM, Jouraku A, Hucka M. Bornstein BJ, et al. Bioinformatics. 2008 Mar 15;24(6):880-1. doi: 10.1093/bioinformatics/btn051. Epub 2008 Feb 5. Bioinformatics. 2008. PMID: 18252737 Free PMC article.