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QUENTIN: reconstruction of disease transmissions from viral quasispecies genomic data.
Skums P, Zelikovsky A, Singh R, Gussler W, Dimitrova Z, Knyazev S, Mandric I, Ramachandran S, Campo D, Jha D, Bunimovich L, Costenbader E, Sexton C, O'Connor S, Xia GL, Khudyakov Y. Skums P, et al. Among authors: bunimovich l. Bioinformatics. 2018 Jan 1;34(1):163-170. doi: 10.1093/bioinformatics/btx402. Bioinformatics. 2018. PMID: 29304222 Free PMC article.
Using earth mover's distance for viral outbreak investigations.
Melnyk A, Knyazev S, Vannberg F, Bunimovich L, Skums P, Zelikovsky A. Melnyk A, et al. Among authors: bunimovich l. BMC Genomics. 2020 Dec 16;21(Suppl 5):582. doi: 10.1186/s12864-020-06982-4. BMC Genomics. 2020. PMID: 33327932 Free PMC article.
Isospectral compression and other useful isospectral transformations of dynamical networks.
Bunimovich LA, Webb BZ. Bunimovich LA, et al. Chaos. 2012 Sep;22(3):033118. doi: 10.1063/1.4739253. Chaos. 2012. PMID: 23020457
We demonstrated that it is possible to reduce a network, considered as a graph, to a smaller network with fewer vertices and edges while preserving the spectrum (or spectral information) of the original network [L. A. Bunimovich and B. Z. Webb, Nonlinearity 25, 211- …
We demonstrated that it is possible to reduce a network, considered as a graph, to a smaller network with fewer vertices and edges while pre …
39 results