Bustamante CD - Search Results

1

Natural selection on protein-coding genes in the human genome.

Bustamante CD, Fledel-Alon A, Williamson S, Nielsen R, Hubisz MT, Glanowski S, Tanenbaum DM, White TJ, Sninsky JJ, Hernandez RD, Civello D, Adams MD, Cargill M, Clark AG. Bustamante CD, et al. Nature. 2005 Oct 20;437(7062):1153-7. doi: 10.1038/nature04240. Nature. 2005. PMID: 16237444

2

A maximum likelihood method for analyzing pseudogene evolution: implications for silent site evolution in humans and rodents.

Bustamante CD, Nielsen R, Hartl DL. Bustamante CD, et al. Mol Biol Evol. 2002 Jan;19(1):110-7. doi: 10.1093/oxfordjournals.molbev.a003975. Mol Biol Evol. 2002. PMID: 11752196

3

The cost of inbreeding in Arabidopsis.

Bustamante CD, Nielsen R, Sawyer SA, Olsen KM, Purugganan MD, Hartl DL. Bustamante CD, et al. Nature. 2002 Apr 4;416(6880):531-4. doi: 10.1038/416531a. Nature. 2002. PMID: 11932744

4

Maximum likelihood and Bayesian methods for estimating the distribution of selective effects among classes of mutations using DNA polymorphism data.

Bustamante CD, Nielsen R, Hartl DL. Bustamante CD, et al. Theor Popul Biol. 2003 Mar;63(2):91-103. doi: 10.1016/s0040-5809(02)00050-3. Theor Popul Biol. 2003. PMID: 12615493

5

Population genetics of polymorphism and divergence for diploid selection models with arbitrary dominance.

Williamson S, Fledel-Alon A, Bustamante CD. Williamson S, et al. Among authors: bustamante cd. Genetics. 2004 Sep;168(1):463-75. doi: 10.1534/genetics.103.024745. Genetics. 2004. PMID: 15454557 Free PMC article.

6

A statistical characterization of consistent patterns of human immunodeficiency virus evolution within infected patients.

Williamson S, Perry SM, Bustamante CD, Orive ME, Stearns MN, Kelly JK. Williamson S, et al. Among authors: bustamante cd. Mol Biol Evol. 2005 Mar;22(3):456-68. doi: 10.1093/molbev/msi029. Epub 2004 Oct 27. Mol Biol Evol. 2005. PMID: 15509726

7

A composite-likelihood approach for detecting directional selection from DNA sequence data.

Zhu L, Bustamante CD. Zhu L, et al. Among authors: bustamante cd. Genetics. 2005 Jul;170(3):1411-21. doi: 10.1534/genetics.104.035097. Epub 2005 May 6. Genetics. 2005. PMID: 15879513 Free PMC article.

8

Simultaneous inference of selection and population growth from patterns of variation in the human genome.

Williamson SH, Hernandez R, Fledel-Alon A, Zhu L, Nielsen R, Bustamante CD. Williamson SH, et al. Among authors: bustamante cd. Proc Natl Acad Sci U S A. 2005 May 31;102(22):7882-7. doi: 10.1073/pnas.0502300102. Epub 2005 May 19. Proc Natl Acad Sci U S A. 2005. PMID: 15905331 Free PMC article.

9

Detecting coevolving amino acid sites using Bayesian mutational mapping.

Dimmic MW, Hubisz MJ, Bustamante CD, Nielsen R. Dimmic MW, et al. Among authors: bustamante cd. Bioinformatics. 2005 Jun;21 Suppl 1:i126-35. doi: 10.1093/bioinformatics/bti1032. Bioinformatics. 2005. PMID: 15961449

10

Ascertainment bias in studies of human genome-wide polymorphism.

Clark AG, Hubisz MJ, Bustamante CD, Williamson SH, Nielsen R. Clark AG, et al. Among authors: bustamante cd. Genome Res. 2005 Nov;15(11):1496-502. doi: 10.1101/gr.4107905. Genome Res. 2005. PMID: 16251459 Free PMC article.

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