Chain B - Search Results

1

Decombinator: a tool for fast, efficient gene assignment in T-cell receptor sequences using a finite state machine.

Thomas N, Heather J, Ndifon W, Shawe-Taylor J, Chain B. Thomas N, et al. Among authors: chain b. Bioinformatics. 2013 Mar 1;29(5):542-50. doi: 10.1093/bioinformatics/btt004. Epub 2013 Jan 9. Bioinformatics. 2013. PMID: 23303508

2

Pure populations of transduced primary human cells can be produced using GFP expressing herpes virus vectors and flow cytometry.

Coffin RS, Thomas SK, Thomas NS, Lilley CE, Pizzey AR, Griffiths CH, Gibb BJ, Wagstaff MJ, Inges SJ, Binks MH, Chain BM, Thrasher AJ, Rutault K, Latchman DS. Coffin RS, et al. Among authors: chain bm. Gene Ther. 1998 May;5(5):718-22. doi: 10.1038/sj.gt.3300634. Gene Ther. 1998. PMID: 9797879

3

The immune system as a biomonitor: explorations in innate and adaptive immunity.

Thomas N, Heather J, Pollara G, Simpson N, Matjeka T, Shawe-Taylor J, Noursadeghi M, Chain B. Thomas N, et al. Among authors: chain b. Interface Focus. 2013 Apr 6;3(2):20120099. doi: 10.1098/rsfs.2012.0099. Interface Focus. 2013. PMID: 24427535 Free PMC article.

4

T-cell receptor repertoires share a restricted set of public and abundant CDR3 sequences that are associated with self-related immunity.

Madi A, Shifrut E, Reich-Zeliger S, Gal H, Best K, Ndifon W, Chain B, Cohen IR, Friedman N. Madi A, et al. Among authors: chain b. Genome Res. 2014 Oct;24(10):1603-12. doi: 10.1101/gr.170753.113. Epub 2014 Jul 14. Genome Res. 2014. PMID: 25024161 Free PMC article.

5

Transcriptional Profiling of Endobronchial Ultrasound-Guided Lymph Node Samples Aids Diagnosis of Mediastinal Lymphadenopathy.

Tomlinson GS, Thomas N, Chain BM, Best K, Simpson N, Hardavella G, Brown J, Bhowmik A, Navani N, Janes SM, Miller RF, Noursadeghi M. Tomlinson GS, et al. Chest. 2016 Feb;149(2):535-544. doi: 10.1378/chest.15-0647. Epub 2016 Jan 12. Chest. 2016. PMID: 26270185 Free PMC article.

6

The sequence of sequencers: The history of sequencing DNA.

Heather JM, Chain B. Heather JM, et al. Among authors: chain b. Genomics. 2016 Jan;107(1):1-8. doi: 10.1016/j.ygeno.2015.11.003. Epub 2015 Nov 10. Genomics. 2016. PMID: 26554401 Free PMC article. Review.

7

Dynamic Perturbations of the T-Cell Receptor Repertoire in Chronic HIV Infection and following Antiretroviral Therapy.

Heather JM, Best K, Oakes T, Gray ER, Roe JK, Thomas N, Friedman N, Noursadeghi M, Chain B. Heather JM, et al. Among authors: chain b. Front Immunol. 2016 Jan 11;6:644. doi: 10.3389/fimmu.2015.00644. eCollection 2015. Front Immunol. 2016. PMID: 26793190 Free PMC article.

8

Validation of Immune Cell Modules in Multicellular Transcriptomic Data.

Pollara G, Murray MJ, Heather JM, Byng-Maddick R, Guppy N, Ellis M, Turner CT, Chain BM, Noursadeghi M. Pollara G, et al. PLoS One. 2017 Jan 3;12(1):e0169271. doi: 10.1371/journal.pone.0169271. eCollection 2017. PLoS One. 2017. PMID: 28045996 Free PMC article.

9

The naive T-cell receptor repertoire has an extremely broad distribution of clone sizes.

de Greef PC, Oakes T, Gerritsen B, Ismail M, Heather JM, Hermsen R, Chain B, de Boer RJ. de Greef PC, et al. Among authors: chain b. Elife. 2020 Mar 18;9:e49900. doi: 10.7554/eLife.49900. Elife. 2020. PMID: 32187010 Free PMC article.

10

Tissue CD14⁺CD8⁺ T cells reprogrammed by myeloid cells and modulated by LPS.

Pallett LJ, Swadling L, Diniz M, Maini AA, Schwabenland M, Gasull AD, Davies J, Kucykowicz S, Skelton JK, Thomas N, Schmidt NM, Amin OE, Gill US, Stegmann KA, Burton AR, Stephenson E, Reynolds G, Whelan M, Sanchez J, de Maeyer R, Thakker C, Suveizdyte K, Uddin I, Ortega-Prieto AM, Grant C, Froghi F, Fusai G, Lens S, Pérez-Del-Pulgar S, Al-Akkad W, Mazza G, Noursadeghi M, Akbar A, Kennedy PTF, Davidson BR, Prinz M, Chain BM, Haniffa M, Gilroy DW, Dorner M, Bengsch B, Schurich A, Maini MK. Pallett LJ, et al. Among authors: chain bm. Nature. 2023 Feb;614(7947):334-342. doi: 10.1038/s41586-022-05645-6. Epub 2023 Jan 25. Nature. 2023. PMID: 36697826

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