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Do orthologous gene phylogenies really support tree-thinking?
Bapteste E, Susko E, Leigh J, MacLeod D, Charlebois RL, Doolittle WF. Bapteste E, et al. Among authors: charlebois rl. BMC Evol Biol. 2005 May 24;5:33. doi: 10.1186/1471-2148-5-33. BMC Evol Biol. 2005. PMID: 15913459 Free PMC article.
The genome of Salinibacter ruber: convergence and gene exchange among hyperhalophilic bacteria and archaea.
Mongodin EF, Nelson KE, Daugherty S, Deboy RT, Wister J, Khouri H, Weidman J, Walsh DA, Papke RT, Sanchez Perez G, Sharma AK, Nesbø CL, MacLeod D, Bapteste E, Doolittle WF, Charlebois RL, Legault B, Rodriguez-Valera F. Mongodin EF, et al. Among authors: charlebois rl. Proc Natl Acad Sci U S A. 2005 Dec 13;102(50):18147-52. doi: 10.1073/pnas.0509073102. Epub 2005 Dec 5. Proc Natl Acad Sci U S A. 2005. PMID: 16330755 Free PMC article.
A simulation test bed for hypotheses of genome evolution.
Beiko RG, Charlebois RL. Beiko RG, et al. Among authors: charlebois rl. Bioinformatics. 2007 Apr 1;23(7):825-31. doi: 10.1093/bioinformatics/btm024. Epub 2007 Jan 31. Bioinformatics. 2007. PMID: 17267425
Weighted genome trees: refinements and applications.
Gophna U, Doolittle WF, Charlebois RL. Gophna U, et al. Among authors: charlebois rl. J Bacteriol. 2005 Feb;187(4):1305-16. doi: 10.1128/JB.187.4.1305-1316.2005. J Bacteriol. 2005. PMID: 15687194 Free PMC article.
56 results