Chen X - Search Results

1

Whole human genome proteogenomic mapping for ENCODE cell line data: identifying protein-coding regions.

Khatun J, Yu Y, Wrobel JA, Risk BA, Gunawardena HP, Secrest A, Spitzer WJ, Xie L, Wang L, Chen X, Giddings MC. Khatun J, et al. Among authors: chen x. BMC Genomics. 2013 Feb 28;14:141. doi: 10.1186/1471-2164-14-141. BMC Genomics. 2013. PMID: 23448259 Free PMC article.

2

Novel secretome-to-transcriptome integrated or secreto-transcriptomic approach to reveal liquid biopsy biomarkers for predicting individualized prognosis of breast cancer patients.

Ankney JA, Xie L, Wrobel JA, Wang L, Chen X. Ankney JA, et al. Among authors: chen x. BMC Med Genomics. 2019 May 30;12(1):78. doi: 10.1186/s12920-019-0530-7. BMC Med Genomics. 2019. PMID: 31146747 Free PMC article.

3

Long noncoding RNAs are rarely translated in two human cell lines.

Bánfai B, Jia H, Khatun J, Wood E, Risk B, Gundling WE Jr, Kundaje A, Gunawardena HP, Yu Y, Xie L, Krajewski K, Strahl BD, Chen X, Bickel P, Giddings MC, Brown JB, Lipovich L. Bánfai B, et al. Among authors: chen x. Genome Res. 2012 Sep;22(9):1646-57. doi: 10.1101/gr.134767.111. Genome Res. 2012. PMID: 22955977 Free PMC article.

4

An integrated encyclopedia of DNA elements in the human genome.

ENCODE Project Consortium. ENCODE Project Consortium. Nature. 2012 Sep 6;489(7414):57-74. doi: 10.1038/nature11247. Nature. 2012. PMID: 22955616 Free PMC article.

5

An Analysis of the Sensitivity of Proteogenomic Mapping of Somatic Mutations and Novel Splicing Events in Cancer.

Ruggles KV, Tang Z, Wang X, Grover H, Askenazi M, Teubl J, Cao S, McLellan MD, Clauser KR, Tabb DL, Mertins P, Slebos R, Erdmann-Gilmore P, Li S, Gunawardena HP, Xie L, Liu T, Zhou JY, Sun S, Hoadley KA, Perou CM, Chen X, Davies SR, Maher CA, Kinsinger CR, Rodland KD, Zhang H, Zhang Z, Ding L, Townsend RR, Rodriguez H, Chan D, Smith RD, Liebler DC, Carr SA, Payne S, Ellis MJ, Fenyő D. Ruggles KV, et al. Among authors: chen x. Mol Cell Proteomics. 2016 Mar;15(3):1060-71. doi: 10.1074/mcp.M115.056226. Epub 2015 Dec 2. Mol Cell Proteomics. 2016. PMID: 26631509 Free PMC article.

6

Protocol for proteogenomic dissection of intronic splicing enhancer interactome for prediction of individualized cancer prognosis.

Wang L, Wrobel JA, Xie L, Chen X. Wang L, et al. Among authors: chen x. STAR Protoc. 2021 Feb 11;2(1):100338. doi: 10.1016/j.xpro.2021.100338. eCollection 2021 Mar 19. STAR Protoc. 2021. PMID: 33644773 Free PMC article.

7

A user's guide to the encyclopedia of DNA elements (ENCODE).

ENCODE Project Consortium. ENCODE Project Consortium. PLoS Biol. 2011 Apr;9(4):e1001046. doi: 10.1371/journal.pbio.1001046. Epub 2011 Apr 19. PLoS Biol. 2011. PMID: 21526222 Free PMC article.

8

An optimized magnetite microparticle-based phosphopeptide enrichment strategy for identifying multiple phosphorylation sites in an immunoprecipitated protein.

Huang Y, Shi Q, Tsung CK, Gunawardena HP, Xie L, Yu Y, Liang H, Yang P, Stucky GD, Chen X. Huang Y, et al. Among authors: chen x. Anal Biochem. 2011 Jan 1;408(1):19-31. doi: 10.1016/j.ab.2010.08.002. Epub 2010 Aug 7. Anal Biochem. 2011. PMID: 20696126

9

Comparison of the membrane proteome of virulent Mycobacterium tuberculosis and the attenuated Mycobacterium bovis BCG vaccine strain by label-free quantitative proteomics.

Gunawardena HP, Feltcher ME, Wrobel JA, Gu S, Braunstein M, Chen X. Gunawardena HP, et al. Among authors: chen x. J Proteome Res. 2013 Dec 6;12(12):5463-74. doi: 10.1021/pr400334k. Epub 2013 Oct 28. J Proteome Res. 2013. PMID: 24093440 Free PMC article.

10

QuantFusion: Novel Unified Methodology for Enhanced Coverage and Precision in Quantifying Global Proteomic Changes in Whole Tissues.

Gunawardena HP, O'Brien J, Wrobel JA, Xie L, Davies SR, Li S, Ellis MJ, Qaqish BF, Chen X. Gunawardena HP, et al. Among authors: chen x. Mol Cell Proteomics. 2016 Feb;15(2):740-51. doi: 10.1074/mcp.O115.049791. Epub 2015 Nov 23. Mol Cell Proteomics. 2016. PMID: 26598639 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My NCBI Filters

Text availability

Article attribute

Article type

Publication date

108,118 results

Search Page