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Page 1
Expansion of the global RNA virome reveals diverse clades of bacteriophages.
Cell. 2022 Oct 13;185(21):4023-4037.e18. doi: 10.1016/j.cell.2022.08.023. Epub 2022 Sep 28.
Cell. 2022.
PMID: 36174579
Free article.
Unraveling the functional dark matter through global metagenomics.
Pavlopoulos GA, Baltoumas FA, Liu S, Selvitopi O, Camargo AP, Nayfach S, Azad A, Roux S, Call L, Ivanova NN, Chen IM, Paez-Espino D, Karatzas E; Novel Metagenome Protein Families Consortium; Iliopoulos I, Konstantinidis K, Tiedje JM, Pett-Ridge J, Baker D, Visel A, Ouzounis CA, Ovchinnikov S, Buluç A, Kyrpides NC.
Pavlopoulos GA, et al.
Nature. 2023 Oct;622(7983):594-602. doi: 10.1038/s41586-023-06583-7. Epub 2023 Oct 11.
Nature. 2023.
PMID: 37821698
Free PMC article.
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Metagenomes and Metatranscriptomes of a Glucose-Amended Agricultural Soil.
Chuckran PF, Huntemann M, Clum A, Foster B, Foster B, Roux S, Palaniappan K, Varghese N, Mukherjee S, Reddy TBK, Daum C, Copeland A, Ivanova NN, Kyrpides NC, Del Rio TG, Eloe-Fadrosh EA, Morrissey EM, Schwartz E, Fofanov V, Hungate B, Dijkstra P.
Chuckran PF, et al.
Microbiol Resour Announc. 2020 Oct 29;9(44):e00895-20. doi: 10.1128/MRA.00895-20.
Microbiol Resour Announc. 2020.
PMID: 33122409
Free PMC article.
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Variation in genomic traits of microbial communities among ecosystems.
Chuckran PF, Hungate BA, Schwartz E, Dijkstra P.
Chuckran PF, et al.
FEMS Microbes. 2021 Dec 1;2:xtab020. doi: 10.1093/femsmc/xtab020. eCollection 2021.
FEMS Microbes. 2021.
PMID: 37334231
Free PMC article.
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Responses of Biocrust and Associated Soil Bacteria to Novel Climates Are Not Tightly Coupled.
Antoninka A, Chuckran PF, Mau RL, Slate ML, Mishler BD, Oliver MJ, Coe KK, Stark LR, Fisher KM, Bowker MA.
Antoninka A, et al. Among authors: chuckran pf.
Front Microbiol. 2022 Apr 28;13:821860. doi: 10.3389/fmicb.2022.821860. eCollection 2022.
Front Microbiol. 2022.
PMID: 35572693
Free PMC article.
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Metatranscriptomes of California grassland soil microbial communities in response to rewetting.
Chuckran PF, Estera-Molina K, Huntemann M, Foster B, Roux S, Mukherjee S, Hajek P, Reddy TBK, Daum C, Chen I-MA, Pennacchio C, Eloe-Fadrosh EA, Dijkstra P, Firestone MK, Blazewicz SJ, Pett-Ridge J.
Chuckran PF, et al.
Microbiol Resour Announc. 2024 May 21:e0032224. doi: 10.1128/mra.00322-24. Online ahead of print.
Microbiol Resour Announc. 2024.
PMID: 38771040
Free article.
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Rapid Response of Nitrogen Cycling Gene Transcription to Labile Carbon Amendments in a Soil Microbial Community.
Chuckran PF, Fofanov V, Hungate BA, Morrissey EM, Schwartz E, Walkup J, Dijkstra P.
Chuckran PF, et al.
mSystems. 2021 May 11;6(3):e00161-21. doi: 10.1128/mSystems.00161-21.
mSystems. 2021.
PMID: 33975966
Free PMC article.
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