Deniz Ö - Search Results

1

Regulation of transposable elements by DNA modifications.

Deniz Ö, Frost JM, Branco MR. Deniz Ö, et al. Nat Rev Genet. 2019 Jul;20(7):417-431. doi: 10.1038/s41576-019-0106-6. Nat Rev Genet. 2019. PMID: 30867571 Review.

2

TET-dependent regulation of retrotransposable elements in mouse embryonic stem cells.

de la Rica L, Deniz Ö, Cheng KC, Todd CD, Cruz C, Houseley J, Branco MR. de la Rica L, et al. Among authors: deniz o. Genome Biol. 2016 Nov 18;17(1):234. doi: 10.1186/s13059-016-1096-8. Genome Biol. 2016. PMID: 27863519 Free PMC article.

3

Author Correction: Regulation of transposable elements by DNA modifications.

Deniz Ö, Frost JM, Branco MR. Deniz Ö, et al. Nat Rev Genet. 2019 Jul;20(7):432. doi: 10.1038/s41576-019-0117-3. Nat Rev Genet. 2019. PMID: 30894697

4

Functional evaluation of transposable elements as enhancers in mouse embryonic and trophoblast stem cells.

Todd CD, Deniz Ö, Taylor D, Branco MR. Todd CD, et al. Among authors: deniz o. Elife. 2019 Apr 23;8:e44344. doi: 10.7554/eLife.44344. Elife. 2019. PMID: 31012843 Free PMC article.

5

Endogenous retroviruses are a source of enhancers with oncogenic potential in acute myeloid leukaemia.

Deniz Ö, Ahmed M, Todd CD, Rio-Machin A, Dawson MA, Branco MR. Deniz Ö, et al. Nat Commun. 2020 Jul 14;11(1):3506. doi: 10.1038/s41467-020-17206-4. Nat Commun. 2020. PMID: 32665538 Free PMC article.

6

SETDB1 prevents TET2-dependent activation of IAP retroelements in naïve embryonic stem cells.

Deniz Ö, de la Rica L, Cheng KCL, Spensberger D, Branco MR. Deniz Ö, et al. Genome Biol. 2018 Jan 19;19(1):6. doi: 10.1186/s13059-017-1376-y. Genome Biol. 2018. PMID: 29351814 Free PMC article.

7

TET2 Regulates the Neuroinflammatory Response in Microglia.

Carrillo-Jimenez A, Deniz Ö, Niklison-Chirou MV, Ruiz R, Bezerra-Salomão K, Stratoulias V, Amouroux R, Yip PK, Vilalta A, Cheray M, Scott-Egerton AM, Rivas E, Tayara K, García-Domínguez I, Garcia-Revilla J, Fernandez-Martin JC, Espinosa-Oliva AM, Shen X, St George-Hyslop P, Brown GC, Hajkova P, Joseph B, Venero JL, Branco MR, Burguillos MA. Carrillo-Jimenez A, et al. Among authors: deniz o. Cell Rep. 2019 Oct 15;29(3):697-713.e8. doi: 10.1016/j.celrep.2019.09.013. Cell Rep. 2019. PMID: 31618637 Free article.

8

Nucleosome architecture throughout the cell cycle.

Deniz Ö, Flores O, Aldea M, Soler-López M, Orozco M. Deniz Ö, et al. Sci Rep. 2016 Jan 28;6:19729. doi: 10.1038/srep19729. Sci Rep. 2016. PMID: 26818620 Free PMC article.

9

Physical properties of naked DNA influence nucleosome positioning and correlate with transcription start and termination sites in yeast.

Deniz O, Flores O, Battistini F, Pérez A, Soler-López M, Orozco M. Deniz O, et al. BMC Genomics. 2011 Oct 7;12:489. doi: 10.1186/1471-2164-12-489. BMC Genomics. 2011. PMID: 21981773 Free PMC article.

10

Fuzziness and noise in nucleosomal architecture.

Flores O, Deniz Ö, Soler-López M, Orozco M. Flores O, et al. Among authors: deniz o. Nucleic Acids Res. 2014 Apr;42(8):4934-46. doi: 10.1093/nar/gku165. Epub 2014 Feb 27. Nucleic Acids Res. 2014. PMID: 24586063 Free PMC article.

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