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CD4 and CD8 binding to MHC molecules primarily acts to enhance Lck delivery.
Artyomov MN, Lis M, Devadas S, Davis MM, Chakraborty AK. Artyomov MN, et al. Among authors: devadas s. Proc Natl Acad Sci U S A. 2010 Sep 28;107(39):16916-21. doi: 10.1073/pnas.1010568107. Epub 2010 Sep 13. Proc Natl Acad Sci U S A. 2010. PMID: 20837541 Free PMC article.
A method for probing the mutational landscape of amyloid structure.
O'Donnell CW, Waldispühl J, Lis M, Halfmann R, Devadas S, Lindquist S, Berger B. O'Donnell CW, et al. Among authors: devadas s. Bioinformatics. 2011 Jul 1;27(13):i34-42. doi: 10.1093/bioinformatics/btr238. Bioinformatics. 2011. PMID: 21685090 Free PMC article.
Modeling ensembles of transmembrane beta-barrel proteins.
Waldispühl J, O'Donnell CW, Devadas S, Clote P, Berger B. Waldispühl J, et al. Among authors: devadas s. Proteins. 2008 May 15;71(3):1097-112. doi: 10.1002/prot.21788. Proteins. 2008. PMID: 18004792
Efficient algorithms for probing the RNA mutation landscape.
Waldispühl J, Devadas S, Berger B, Clote P. Waldispühl J, et al. Among authors: devadas s. PLoS Comput Biol. 2008 Aug 8;4(8):e1000124. doi: 10.1371/journal.pcbi.1000124. PLoS Comput Biol. 2008. PMID: 18688270 Free PMC article.
Simultaneous alignment and folding of protein sequences.
Waldispühl J, O'Donnell CW, Will S, Devadas S, Backofen R, Berger B. Waldispühl J, et al. Among authors: devadas s. J Comput Biol. 2014 Jul;21(7):477-91. doi: 10.1089/cmb.2013.0163. Epub 2014 Apr 25. J Comput Biol. 2014. PMID: 24766258 Free PMC article.
Learning biophysically-motivated parameters for alpha helix prediction.
Gassend B, O'Donnell CW, Thies W, Lee A, van Dijk M, Devadas S. Gassend B, et al. Among authors: devadas s. BMC Bioinformatics. 2007 May 24;8 Suppl 5(Suppl 5):S3. doi: 10.1186/1471-2105-8-S5-S3. BMC Bioinformatics. 2007. PMID: 17570862 Free PMC article.
75 results