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Closely related Campylobacter jejuni strains from different sources reveal a generalist rather than a specialist lifestyle.
Gripp E, Hlahla D, Didelot X, Kops F, Maurischat S, Tedin K, Alter T, Ellerbroek L, Schreiber K, Schomburg D, Janssen T, Bartholomäus P, Hofreuter D, Woltemate S, Uhr M, Brenneke B, Grüning P, Gerlach G, Wieler L, Suerbaum S, Josenhans C. Gripp E, et al. Among authors: didelot x. BMC Genomics. 2011 Nov 28;12:584. doi: 10.1186/1471-2164-12-584. BMC Genomics. 2011. PMID: 22122991 Free PMC article.
Evolutionary History of the Global Emergence of the Escherichia coli Epidemic Clone ST131.
Stoesser N, Sheppard AE, Pankhurst L, De Maio N, Moore CE, Sebra R, Turner P, Anson LW, Kasarskis A, Batty EM, Kos V, Wilson DJ, Phetsouvanh R, Wyllie D, Sokurenko E, Manges AR, Johnson TJ, Price LB, Peto TE, Johnson JR, Didelot X, Walker AS, Crook DW; Modernizing Medical Microbiology Informatics Group (MMMIG). Stoesser N, et al. Among authors: didelot x. mBio. 2016 Mar 22;7(2):e02162. doi: 10.1128/mBio.02162-15. mBio. 2016. PMID: 27006459 Free PMC article.
Hospital outbreak of carbapenem-resistant Enterobacterales associated with a blaOXA-48 plasmid carried mostly by Escherichia coli ST399.
Ledda A, Cummins M, Shaw LP, Jauneikaite E, Cole K, Lasalle F, Barry D, Turton J, Rosmarin C, Anaraki S, Wareham D, Stoesser N, Paul J, Manuel R, Cherian BP, Didelot X. Ledda A, et al. Among authors: didelot x. Microb Genom. 2022 Apr;8(4):000675. doi: 10.1099/mgen.0.000675. Microb Genom. 2022. PMID: 35442183 Free PMC article.
Burkholderia pseudomallei sequencing identifies genomic clades with distinct recombination, accessory, and epigenetic profiles.
Nandi T, Holden MT, Didelot X, Mehershahi K, Boddey JA, Beacham I, Peak I, Harting J, Baybayan P, Guo Y, Wang S, How LC, Sim B, Essex-Lopresti A, Sarkar-Tyson M, Nelson M, Smither S, Ong C, Aw LT, Hoon CH, Michell S, Studholme DJ, Titball R, Chen SL, Parkhill J, Tan P. Nandi T, et al. Among authors: didelot x. Genome Res. 2015 Jan;25(1):129-41. doi: 10.1101/gr.177543.114. Epub 2014 Sep 18. Genome Res. 2015. PMID: 25236617 Free PMC article.
Declaring a tuberculosis outbreak over with genomic epidemiology.
Hatherell HA, Didelot X, Pollock SL, Tang P, Crisan A, Johnston JC, Colijn C, Gardy JL. Hatherell HA, et al. Among authors: didelot x. Microb Genom. 2016 May 31;2(5):e000060. doi: 10.1099/mgen.0.000060. eCollection 2016 May. Microb Genom. 2016. PMID: 28348853 Free PMC article.
Genomic surveillance of Neisseria gonorrhoeae to investigate the distribution and evolution of antimicrobial-resistance determinants and lineages.
Yahara K, Nakayama SI, Shimuta K, Lee KI, Morita M, Kawahata T, Kuroki T, Watanabe Y, Ohya H, Yasuda M, Deguchi T, Didelot X, Ohnishi M. Yahara K, et al. Among authors: didelot x. Microb Genom. 2018 Aug;4(8):e000205. doi: 10.1099/mgen.0.000205. Epub 2018 Jul 31. Microb Genom. 2018. PMID: 30063202 Free PMC article.
176 results