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Whole-genome analyses resolve early branches in the tree of life of modern birds.
Jarvis ED, Mirarab S, Aberer AJ, Li B, Houde P, Li C, Ho SY, Faircloth BC, Nabholz B, Howard JT, Suh A, Weber CC, da Fonseca RR, Li J, Zhang F, Li H, Zhou L, Narula N, Liu L, Ganapathy G, Boussau B, Bayzid MS, Zavidovych V, Subramanian S, Gabaldón T, Capella-Gutiérrez S, Huerta-Cepas J, Rekepalli B, Munch K, Schierup M, Lindow B, Warren WC, Ray D, Green RE, Bruford MW, Zhan X, Dixon A, Li S, Li N, Huang Y, Derryberry EP, Bertelsen MF, Sheldon FH, Brumfield RT, Mello CV, Lovell PV, Wirthlin M, Schneider MP, Prosdocimi F, Samaniego JA, Vargas Velazquez AM, Alfaro-Núñez A, Campos PF, Petersen B, Sicheritz-Ponten T, Pas A, Bailey T, Scofield P, Bunce M, Lambert DM, Zhou Q, Perelman P, Driskell AC, Shapiro B, Xiong Z, Zeng Y, Liu S, Li Z, Liu B, Wu K, Xiao J, Yinqi X, Zheng Q, Zhang Y, Yang H, Wang J, Smeds L, Rheindt FE, Braun M, Fjeldsa J, Orlando L, Barker FK, Jønsson KA, Johnson W, Koepfli KP, O'Brien S, Haussler D, Ryder OA, Rahbek C, Willerslev E, Graves GR, Glenn TC, McCormack J, Burt D, Ellegren H, Alström P, Edwards SV, Stamatakis A, Mindell DP, Cracraft J, Braun EL, Warnow T, Jun W, Gilbert MT, Zhang G. Jarvis ED, et al. Among authors: edwards sv. Science. 2014 Dec 12;346(6215):1320-31. doi: 10.1126/science.1253451. Science. 2014. PMID: 25504713 Free PMC article.
Phylogenetics of modern birds in the era of genomics.
Edwards SV, Bryan Jennings W, Shedlock AM. Edwards SV, et al. Proc Biol Sci. 2005 May 22;272(1567):979-92. doi: 10.1098/rspb.2004.3035. Proc Biol Sci. 2005. PMID: 16024355 Free PMC article. Review.
High-resolution species trees without concatenation.
Edwards SV, Liu L, Pearl DK. Edwards SV, et al. Proc Natl Acad Sci U S A. 2007 Apr 3;104(14):5936-41. doi: 10.1073/pnas.0607004104. Epub 2007 Mar 28. Proc Natl Acad Sci U S A. 2007. PMID: 17392434 Free PMC article.
Coalescent methods for estimating phylogenetic trees.
Liu L, Yu L, Kubatko L, Pearl DK, Edwards SV. Liu L, et al. Among authors: edwards sv. Mol Phylogenet Evol. 2009 Oct;53(1):320-8. doi: 10.1016/j.ympev.2009.05.033. Epub 2009 Jun 6. Mol Phylogenet Evol. 2009. PMID: 19501178 Review.
Comparative genomics based on massive parallel transcriptome sequencing reveals patterns of substitution and selection across 10 bird species.
Künstner A, Wolf JB, Backström N, Whitney O, Balakrishnan CN, Day L, Edwards SV, Janes DE, Schlinger BA, Wilson RK, Jarvis ED, Warren WC, Ellegren H. Künstner A, et al. Among authors: edwards sv. Mol Ecol. 2010 Mar;19 Suppl 1(Suppl 1):266-76. doi: 10.1111/j.1365-294X.2009.04487.x. Mol Ecol. 2010. PMID: 20331785 Free PMC article.
208 results