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Characterization of genetic loci that affect susceptibility to inflammatory bowel diseases in African Americans.
Huang C, Haritunians T, Okou DT, Cutler DJ, Zwick ME, Taylor KD, Datta LW, Maranville JC, Liu Z, Ellis S, Chopra P, Alexander JS, Baldassano RN, Cross RK, Dassopoulos T, Dhere TA, Duerr RH, Hanson JS, Hou JK, Hussain SZ, Isaacs KL, Kachelries KE, Kader H, Kappelman MD, Katz J, Kellermayer R, Kirschner BS, Kuemmerle JF, Kumar A, Kwon JH, Lazarev M, Mannon P, Moulton DE, Osuntokun BO, Patel A, Rioux JD, Rotter JI, Saeed S, Scherl EJ, Silverberg MS, Silverman A, Targan SR, Valentine JF, Wang MH, Simpson CL, Bridges SL, Kimberly RP, Rich SS, Cho JH, Rienzo AD, Kao LWH, McGovern DPB, Brant SR, Kugathasan S. Huang C, et al. Among authors: ellis s. Gastroenterology. 2015 Nov;149(6):1575-1586. doi: 10.1053/j.gastro.2015.07.065. Epub 2015 Aug 14. Gastroenterology. 2015. PMID: 26278503 Free PMC article.
Exaggerated CpH methylation in the autism-affected brain.
Ellis SE, Gupta S, Moes A, West AB, Arking DE. Ellis SE, et al. Mol Autism. 2017 Feb 17;8:6. doi: 10.1186/s13229-017-0119-y. eCollection 2017. Mol Autism. 2017. PMID: 28316770 Free PMC article.
Reproducible RNA-seq analysis using recount2.
Collado-Torres L, Nellore A, Kammers K, Ellis SE, Taub MA, Hansen KD, Jaffe AE, Langmead B, Leek JT. Collado-Torres L, et al. Nat Biotechnol. 2017 Apr 11;35(4):319-321. doi: 10.1038/nbt.3838. Nat Biotechnol. 2017. PMID: 28398307 Free PMC article. No abstract available.
How to share data for collaboration.
Ellis SE, Leek JT. Ellis SE, et al. Am Stat. 2018;72(1):53-57. doi: 10.1080/00031305.2017.1375987. Epub 2018 Apr 24. Am Stat. 2018. PMID: 32981941 Free PMC article.
RNA-Seq optimization with eQTL gold standards.
Ellis SE, Gupta S, Ashar FN, Bader JS, West AB, Arking DE. Ellis SE, et al. BMC Genomics. 2013 Dec 17;14:892. doi: 10.1186/1471-2164-14-892. BMC Genomics. 2013. PMID: 24341889 Free PMC article.
2,848 results