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ChEBI: a database and ontology for chemical entities of biological interest.
Degtyarenko K, de Matos P, Ennis M, Hastings J, Zbinden M, McNaught A, Alcántara R, Darsow M, Guedj M, Ashburner M. Degtyarenko K, et al. Among authors: ennis m. Nucleic Acids Res. 2008 Jan;36(Database issue):D344-50. doi: 10.1093/nar/gkm791. Epub 2007 Oct 11. Nucleic Acids Res. 2008. PMID: 17932057 Free PMC article.
ChEBI: an open bioinformatics and cheminformatics resource.
Degtyarenko K, Hastings J, de Matos P, Ennis M. Degtyarenko K, et al. Among authors: ennis m. Curr Protoc Bioinformatics. 2009 Jun;Chapter 14:14.9.1-14.9.20. doi: 10.1002/0471250953.bi1409s26. Curr Protoc Bioinformatics. 2009. PMID: 19496059
Chemical Entities of Biological Interest: an update.
de Matos P, Alcántara R, Dekker A, Ennis M, Hastings J, Haug K, Spiteri I, Turner S, Steinbeck C. de Matos P, et al. Among authors: ennis m. Nucleic Acids Res. 2010 Jan;38(Database issue):D249-54. doi: 10.1093/nar/gkp886. Epub 2009 Oct 23. Nucleic Acids Res. 2010. PMID: 19854951 Free PMC article.
Rhea--a manually curated resource of biochemical reactions.
Alcántara R, Axelsen KB, Morgat A, Belda E, Coudert E, Bridge A, Cao H, de Matos P, Ennis M, Turner S, Owen G, Bougueleret L, Xenarios I, Steinbeck C. Alcántara R, et al. Among authors: ennis m. Nucleic Acids Res. 2012 Jan;40(Database issue):D754-60. doi: 10.1093/nar/gkr1126. Epub 2011 Dec 1. Nucleic Acids Res. 2012. PMID: 22135291 Free PMC article.
Dovetailing biology and chemistry: integrating the Gene Ontology with the ChEBI chemical ontology.
Hill DP, Adams N, Bada M, Batchelor C, Berardini TZ, Dietze H, Drabkin HJ, Ennis M, Foulger RE, Harris MA, Hastings J, Kale NS, de Matos P, Mungall CJ, Owen G, Roncaglia P, Steinbeck C, Turner S, Lomax J. Hill DP, et al. Among authors: ennis m. BMC Genomics. 2013 Jul 29;14:513. doi: 10.1186/1471-2164-14-513. BMC Genomics. 2013. PMID: 23895341 Free PMC article.
ChEBI in 2016: Improved services and an expanding collection of metabolites.
Hastings J, Owen G, Dekker A, Ennis M, Kale N, Muthukrishnan V, Turner S, Swainston N, Mendes P, Steinbeck C. Hastings J, et al. Among authors: ennis m. Nucleic Acids Res. 2016 Jan 4;44(D1):D1214-9. doi: 10.1093/nar/gkv1031. Epub 2015 Oct 13. Nucleic Acids Res. 2016. PMID: 26467479 Free PMC article.
Structure-based classification and ontology in chemistry.
Hastings J, Magka D, Batchelor C, Duan L, Stevens R, Ennis M, Steinbeck C. Hastings J, et al. Among authors: ennis m. J Cheminform. 2012 Apr 5;4:8. doi: 10.1186/1758-2946-4-8. J Cheminform. 2012. PMID: 22480202 Free PMC article.
OntoQuery: easy-to-use web-based OWL querying.
Tudose I, Hastings J, Muthukrishnan V, Owen G, Turner S, Dekker A, Kale N, Ennis M, Steinbeck C. Tudose I, et al. Among authors: ennis m. Bioinformatics. 2013 Nov 15;29(22):2955-7. doi: 10.1093/bioinformatics/btt514. Epub 2013 Sep 5. Bioinformatics. 2013. PMID: 24008420 Free PMC article.
458 results