Fitzpatrick DA - Search Results

1

A pluralistic account of homology: adapting the models to the data.

Haggerty LS, Jachiet PA, Hanage WP, Fitzpatrick DA, Lopez P, O'Connell MJ, Pisani D, Wilkinson M, Bapteste E, McInerney JO. Haggerty LS, et al. Among authors: fitzpatrick da. Mol Biol Evol. 2014 Mar;31(3):501-16. doi: 10.1093/molbev/mst228. Epub 2013 Nov 22. Mol Biol Evol. 2014. PMID: 24273322 Free PMC article. Review.

2

Fatty acid biosynthesis in Mycobacterium tuberculosis: lateral gene transfer, adaptive evolution, and gene duplication.

Kinsella RJ, Fitzpatrick DA, Creevey CJ, McInerney JO. Kinsella RJ, et al. Among authors: fitzpatrick da. Proc Natl Acad Sci U S A. 2003 Sep 2;100(18):10320-5. doi: 10.1073/pnas.1737230100. Epub 2003 Aug 13. Proc Natl Acad Sci U S A. 2003. PMID: 12917487 Free PMC article.

3

Does a tree-like phylogeny only exist at the tips in the prokaryotes?

Creevey CJ, Fitzpatrick DA, Philip GK, Kinsella RJ, O'Connell MJ, Pentony MM, Travers SA, Wilkinson M, McInerney JO. Creevey CJ, et al. Among authors: fitzpatrick da. Proc Biol Sci. 2004 Dec 22;271(1557):2551-8. doi: 10.1098/rspb.2004.2864. Proc Biol Sci. 2004. PMID: 15615680 Free PMC article.

4

Evidence of positive Darwinian selection in Omp85, a highly conserved bacterial outer membrane protein essential for cell viability.

Fitzpatrick DA, McInerney JO. Fitzpatrick DA, et al. J Mol Evol. 2005 Feb;60(2):268-73. doi: 10.1007/s00239-004-0194-5. J Mol Evol. 2005. PMID: 15785855

5

Evidence of positive Darwinian selection in putative meningococcal vaccine antigens.

Fitzpatrick DA, Creevey CJ, McInerney JO. Fitzpatrick DA, et al. J Mol Evol. 2005 Jul;61(1):90-8. doi: 10.1007/s00239-004-0290-6. Epub 2005 Jun 29. J Mol Evol. 2005. PMID: 16007491

6

Genome phylogenies indicate a meaningful alpha-proteobacterial phylogeny and support a grouping of the mitochondria with the Rickettsiales.

Fitzpatrick DA, Creevey CJ, McInerney JO. Fitzpatrick DA, et al. Mol Biol Evol. 2006 Jan;23(1):74-85. doi: 10.1093/molbev/msj009. Epub 2005 Sep 8. Mol Biol Evol. 2006. PMID: 16151187

7

The molecular phylogeny of a nematode-specific clade of heterotrimeric G-protein alpha-subunit genes.

O'Halloran DM, Fitzpatrick DA, McCormack GP, McInerney JO, Burnell AM. O'Halloran DM, et al. Among authors: fitzpatrick da. J Mol Evol. 2006 Jul;63(1):87-94. doi: 10.1007/s00239-005-0215-z. Epub 2006 Jun 16. J Mol Evol. 2006. PMID: 16786439

8

Lines of evidence for horizontal gene transfer of a phenazine producing operon into multiple bacterial species.

Fitzpatrick DA. Fitzpatrick DA. J Mol Evol. 2009 Feb;68(2):171-85. doi: 10.1007/s00239-009-9198-5. Epub 2009 Feb 3. J Mol Evol. 2009. PMID: 19189039

9

Gene and genome trees conflict at many levels.

Haggerty LS, Martin FJ, Fitzpatrick DA, McInerney JO. Haggerty LS, et al. Among authors: fitzpatrick da. Philos Trans R Soc Lond B Biol Sci. 2009 Aug 12;364(1527):2209-19. doi: 10.1098/rstb.2009.0042. Philos Trans R Soc Lond B Biol Sci. 2009. PMID: 19571241 Free PMC article.

10

Comparative Analysis of Oomycete Genome Evolution Using the Oomycete Gene Order Browser (OGOB).

McGowan J, Byrne KP, Fitzpatrick DA. McGowan J, et al. Among authors: fitzpatrick da. Genome Biol Evol. 2019 Jan 1;11(1):189-206. doi: 10.1093/gbe/evy267. Genome Biol Evol. 2019. PMID: 30535146 Free PMC article.

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