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Computational and experimental insights into the circadian effects of SIRT1.
Foteinou PT, Venkataraman A, Francey LJ, Anafi RC, Hogenesch JB, Doyle FJ 3rd. Foteinou PT, et al. Among authors: francey lj. Proc Natl Acad Sci U S A. 2018 Nov 6;115(45):11643-11648. doi: 10.1073/pnas.1803410115. Epub 2018 Oct 22. Proc Natl Acad Sci U S A. 2018. PMID: 30348778 Free PMC article.
Role for LSM genes in the regulation of circadian rhythms.
Perez-Santángelo S, Mancini E, Francey LJ, Schlaen RG, Chernomoretz A, Hogenesch JB, Yanovsky MJ. Perez-Santángelo S, et al. Among authors: francey lj. Proc Natl Acad Sci U S A. 2014 Oct 21;111(42):15166-71. doi: 10.1073/pnas.1409791111. Epub 2014 Oct 6. Proc Natl Acad Sci U S A. 2014. PMID: 25288739 Free PMC article.
The Local Edge Machine: inference of dynamic models of gene regulation.
McGoff KA, Guo X, Deckard A, Kelliher CM, Leman AR, Francey LJ, Hogenesch JB, Haase SB, Harer JL. McGoff KA, et al. Among authors: francey lj. Genome Biol. 2016 Oct 19;17(1):214. doi: 10.1186/s13059-016-1076-z. Genome Biol. 2016. PMID: 27760556 Free PMC article.
Clock Regulation of Metabolites Reveals Coupling between Transcription and Metabolism.
Krishnaiah SY, Wu G, Altman BJ, Growe J, Rhoades SD, Coldren F, Venkataraman A, Olarerin-George AO, Francey LJ, Mukherjee S, Girish S, Selby CP, Cal S, Er U, Sianati B, Sengupta A, Anafi RC, Kavakli IH, Sancar A, Baur JA, Dang CV, Hogenesch JB, Weljie AM. Krishnaiah SY, et al. Among authors: francey lj. Cell Metab. 2017 Apr 4;25(4):961-974.e4. doi: 10.1016/j.cmet.2017.03.019. Cell Metab. 2017. PMID: 28380384 Free PMC article.
CYCLOPS reveals human transcriptional rhythms in health and disease.
Anafi RC, Francey LJ, Hogenesch JB, Kim J. Anafi RC, et al. Among authors: francey lj. Proc Natl Acad Sci U S A. 2017 May 16;114(20):5312-5317. doi: 10.1073/pnas.1619320114. Epub 2017 Apr 24. Proc Natl Acad Sci U S A. 2017. PMID: 28439010 Free PMC article.
Clock Regulation of Metabolites Reveals Coupling between Transcription and Metabolism.
Krishnaiah SY, Wu G, Altman BJ, Growe J, Rhoades SD, Coldren F, Venkataraman A, Olarerin-George AO, Francey LJ, Mukherjee S, Girish S, Selby CP, Cal S, Er U, Sianati B, Sengupta A, Anafi RC, Kavakli IH, Sancar A, Baur JA, Dang CV, Hogenesch JB, Weljie AM. Krishnaiah SY, et al. Among authors: francey lj. Cell Metab. 2017 May 2;25(5):1206. doi: 10.1016/j.cmet.2017.04.023. Cell Metab. 2017. PMID: 28467936 Free article. No abstract available.
It's not all in the brain.
Francey LJ, Hogenesch JB. Francey LJ, et al. Elife. 2017 Aug 29;6:e30561. doi: 10.7554/eLife.30561. Elife. 2017. PMID: 28850329 Free PMC article.
Guidelines for Genome-Scale Analysis of Biological Rhythms.
Hughes ME, Abruzzi KC, Allada R, Anafi R, Arpat AB, Asher G, Baldi P, de Bekker C, Bell-Pedersen D, Blau J, Brown S, Ceriani MF, Chen Z, Chiu JC, Cox J, Crowell AM, DeBruyne JP, Dijk DJ, DiTacchio L, Doyle FJ, Duffield GE, Dunlap JC, Eckel-Mahan K, Esser KA, FitzGerald GA, Forger DB, Francey LJ, Fu YH, Gachon F, Gatfield D, de Goede P, Golden SS, Green C, Harer J, Harmer S, Haspel J, Hastings MH, Herzel H, Herzog ED, Hoffmann C, Hong C, Hughey JJ, Hurley JM, de la Iglesia HO, Johnson C, Kay SA, Koike N, Kornacker K, Kramer A, Lamia K, Leise T, Lewis SA, Li J, Li X, Liu AC, Loros JJ, Martino TA, Menet JS, Merrow M, Millar AJ, Mockler T, Naef F, Nagoshi E, Nitabach MN, Olmedo M, Nusinow DA, Ptáček LJ, Rand D, Reddy AB, Robles MS, Roenneberg T, Rosbash M, Ruben MD, Rund SSC, Sancar A, Sassone-Corsi P, Sehgal A, Sherrill-Mix S, Skene DJ, Storch KF, Takahashi JS, Ueda HR, Wang H, Weitz C, Westermark PO, Wijnen H, Xu Y, Wu G, Yoo SH, Young M, Zhang EE, Zielinski T, Hogenesch JB. Hughes ME, et al. Among authors: francey lj. J Biol Rhythms. 2017 Oct;32(5):380-393. doi: 10.1177/0748730417728663. Epub 2017 Nov 3. J Biol Rhythms. 2017. PMID: 29098954 Free PMC article.
Circadian Dysregulation: The Next Frontier in Obstructive Sleep Apnea Research.
von Allmen DC, Francey LJ, Rogers GM, Ruben MD, Cohen AP, Wu G, Schmidt RE, Ishman SL, Amin RS, Hogenesch JB, Smith DF. von Allmen DC, et al. Among authors: francey lj. Otolaryngol Head Neck Surg. 2018 Dec;159(6):948-955. doi: 10.1177/0194599818797311. Epub 2018 Sep 11. Otolaryngol Head Neck Surg. 2018. PMID: 30200807 Review.
37 results