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Rearrangement moves on rooted phylogenetic networks.
Gambette P, van Iersel L, Jones M, Lafond M, Pardi F, Scornavacca C. Gambette P, et al. PLoS Comput Biol. 2017 Aug 1;13(8):e1005611. doi: 10.1371/journal.pcbi.1005611. eCollection 2017 Aug. PLoS Comput Biol. 2017. PMID: 28763439 Free PMC article.
Uprooted Phylogenetic Networks.
Gambette P, Huber KT, Scholz GE. Gambette P, et al. Bull Math Biol. 2017 Sep;79(9):2022-2048. doi: 10.1007/s11538-017-0318-x. Epub 2017 Jul 31. Bull Math Biol. 2017. PMID: 28762018 Free PMC article.
Counting phylogenetic networks of level 1 and 2.
Bouvel M, Gambette P, Mansouri M. Bouvel M, et al. Among authors: gambette p. J Math Biol. 2020 Dec;81(6-7):1357-1395. doi: 10.1007/s00285-020-01543-5. Epub 2020 Oct 1. J Math Biol. 2020. PMID: 33005997
Quartets and unrooted phylogenetic networks.
Gambette P, Berry V, Paul C. Gambette P, et al. J Bioinform Comput Biol. 2012 Aug;10(4):1250004. doi: 10.1142/S0219720012500047. Epub 2012 Jun 22. J Bioinform Comput Biol. 2012. PMID: 22809417 Free article.
Improved layout of phylogenetic networks.
Gambette P, Huson DH. Gambette P, et al. IEEE/ACM Trans Comput Biol Bioinform. 2008 Jul-Sep;5(3):472-479. doi: 10.1109/tcbb.2007.1046. IEEE/ACM Trans Comput Biol Bioinform. 2008. PMID: 18670049
Computing galled networks from real data.
Huson DH, Rupp R, Berry V, Gambette P, Paul C. Huson DH, et al. Among authors: gambette p. Bioinformatics. 2009 Jun 15;25(12):i85-93. doi: 10.1093/bioinformatics/btp217. Bioinformatics. 2009. PMID: 19478021 Free PMC article.
13 results