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Proteny: discovering and visualizing statistically significant syntenic clusters at the proteome level.
Gehrmann T, Reinders MJ. Gehrmann T, et al. Bioinformatics. 2015 Nov 1;31(21):3437-44. doi: 10.1093/bioinformatics/btv389. Epub 2015 Jun 27. Bioinformatics. 2015. PMID: 26116928 Free PMC article.
AVAILABILITY AND IMPLEMENTATION: Proteny is freely available at the Delft Bioinformatics Lab website http://bioinformatics.tudelft.nl/dbl/software. CONTACT: t.gehrmann@tudelft.nl SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online... …
AVAILABILITY AND IMPLEMENTATION: Proteny is freely available at the Delft Bioinformatics Lab website http://bioinformatics.tudelft.nl/dbl/so …
The transcriptional regulator c2h2 accelerates mushroom formation in Agaricus bisporus.
Pelkmans JF, Vos AM, Scholtmeijer K, Hendrix E, Baars JJ, Gehrmann T, Reinders MJ, Lugones LG, Wösten HA. Pelkmans JF, et al. Among authors: gehrmann t. Appl Microbiol Biotechnol. 2016 Aug;100(16):7151-9. doi: 10.1007/s00253-016-7574-9. Epub 2016 May 21. Appl Microbiol Biotechnol. 2016. PMID: 27207144 Free PMC article.
Mycobacterium tuberculosis Whole Genome Sequences From Southern India Suggest Novel Resistance Mechanisms and the Need for Region-Specific Diagnostics.
Manson AL, Abeel T, Galagan JE, Sundaramurthi JC, Salazar A, Gehrmann T, Shanmugam SK, Palaniyandi K, Narayanan S, Swaminathan S, Earl AM. Manson AL, et al. Among authors: gehrmann t. Clin Infect Dis. 2017 Jun 1;64(11):1494-1501. doi: 10.1093/cid/cix169. Clin Infect Dis. 2017. PMID: 28498943 Free PMC article.
Design and Experimental Evaluation of a Minimal, Innocuous Watermarking Strategy to Distinguish Near-Identical DNA and RNA Sequences.
Boonekamp FJ, Dashko S, Duiker D, Gehrmann T, van den Broek M, den Ridder M, Pabst M, Robert V, Abeel T, Postma ED, Daran JM, Daran-Lapujade P. Boonekamp FJ, et al. Among authors: gehrmann t. ACS Synth Biol. 2020 Jun 19;9(6):1361-1375. doi: 10.1021/acssynbio.0c00045. Epub 2020 Jun 3. ACS Synth Biol. 2020. PMID: 32413257 Free PMC article.
68 results