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The Genomic HyperBrowser: an analysis web server for genome-scale data.
Sandve GK, Gundersen S, Johansen M, Glad IK, Gunathasan K, Holden L, Holden M, Liestøl K, Nygård S, Nygaard V, Paulsen J, Rydbeck H, Trengereid K, Clancy T, Drabløs F, Ferkingstad E, Kalas M, Lien T, Rye MB, Frigessi A, Hovig E. Sandve GK, et al. Among authors: glad ik. Nucleic Acids Res. 2013 Jul;41(Web Server issue):W133-41. doi: 10.1093/nar/gkt342. Epub 2013 Apr 30. Nucleic Acids Res. 2013. PMID: 23632163 Free PMC article.
The Genomic HyperBrowser: inferential genomics at the sequence level.
Sandve GK, Gundersen S, Rydbeck H, Glad IK, Holden L, Holden M, Liestøl K, Clancy T, Ferkingstad E, Johansen M, Nygaard V, Tøstesen E, Frigessi A, Hovig E. Sandve GK, et al. Among authors: glad ik. Genome Biol. 2010;11(12):R121. doi: 10.1186/gb-2010-11-12-r121. Epub 2010 Dec 23. Genome Biol. 2010. PMID: 21182759 Free PMC article.
The differential disease regulome.
Sandve GK, Gundersen S, Rydbeck H, Glad IK, Holden L, Holden M, Liestøl K, Clancy T, Drabløs F, Ferkingstad E, Johansen M, Nygaard V, Tøstesen E, Frigessi A, Hovig E. Sandve GK, et al. Among authors: glad ik. BMC Genomics. 2011 Jul 7;12:353. doi: 10.1186/1471-2164-12-353. BMC Genomics. 2011. PMID: 21736759 Free PMC article.
GSuite HyperBrowser: integrative analysis of dataset collections across the genome and epigenome.
Simovski B, Vodák D, Gundersen S, Domanska D, Azab A, Holden L, Holden M, Grytten I, Rand K, Drabløs F, Johansen M, Mora A, Lund-Andersen C, Fromm B, Eskeland R, Gabrielsen OS, Ferkingstad E, Nakken S, Bengtsen M, Nederbragt AJ, Thorarensen HS, Akse JA, Glad I, Hovig E, Sandve GK. Simovski B, et al. Gigascience. 2017 Jul 1;6(7):1-12. doi: 10.1093/gigascience/gix032. Gigascience. 2017. PMID: 28459977 Free PMC article.
Coordinates and intervals in graph-based reference genomes.
Rand KD, Grytten I, Nederbragt AJ, Storvik GO, Glad IK, Sandve GK. Rand KD, et al. Among authors: glad ik. BMC Bioinformatics. 2017 May 18;18(1):263. doi: 10.1186/s12859-017-1678-9. BMC Bioinformatics. 2017. PMID: 28521770 Free PMC article.
CGH-Explorer: a program for analysis of array-CGH data.
Lingjaerde OC, Baumbusch LO, Liestøl K, Glad IK, Børresen-Dale AL. Lingjaerde OC, et al. Among authors: glad ik. Bioinformatics. 2005 Mar;21(6):821-2. doi: 10.1093/bioinformatics/bti113. Epub 2004 Nov 5. Bioinformatics. 2005. PMID: 15531610
Graph Peak Caller: Calling ChIP-seq peaks on graph-based reference genomes.
Grytten I, Rand KD, Nederbragt AJ, Storvik GO, Glad IK, Sandve GK. Grytten I, et al. Among authors: glad ik. PLoS Comput Biol. 2019 Feb 19;15(2):e1006731. doi: 10.1371/journal.pcbi.1006731. eCollection 2019 Feb. PLoS Comput Biol. 2019. PMID: 30779737 Free PMC article.
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