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The evolution of metabolic networks of E. coli.
Baumler DJ, Peplinski RG, Reed JL, Glasner JD, Perna NT. Baumler DJ, et al. Among authors: glasner jd. BMC Syst Biol. 2011 Nov 1;5:182. doi: 10.1186/1752-0509-5-182. BMC Syst Biol. 2011. PMID: 22044664 Free PMC article.
The complete genome sequence of Escherichia coli K-12.
Blattner FR, Plunkett G 3rd, Bloch CA, Perna NT, Burland V, Riley M, Collado-Vides J, Glasner JD, Rode CK, Mayhew GF, Gregor J, Davis NW, Kirkpatrick HA, Goeden MA, Rose DJ, Mau B, Shao Y. Blattner FR, et al. Among authors: glasner jd. Science. 1997 Sep 5;277(5331):1453-62. doi: 10.1126/science.277.5331.1453. Science. 1997. PMID: 9278503
Genome sequence of enterohaemorrhagic Escherichia coli O157:H7.
Perna NT, Plunkett G 3rd, Burland V, Mau B, Glasner JD, Rose DJ, Mayhew GF, Evans PS, Gregor J, Kirkpatrick HA, Pósfai G, Hackett J, Klink S, Boutin A, Shao Y, Miller L, Grotbeck EJ, Davis NW, Lim A, Dimalanta ET, Potamousis KD, Apodaca J, Anantharaman TS, Lin J, Yen G, Schwartz DC, Welch RA, Blattner FR. Perna NT, et al. Among authors: glasner jd. Nature. 2001 Jan 25;409(6819):529-33. doi: 10.1038/35054089. Nature. 2001. PMID: 11206551
ASAP, a systematic annotation package for community analysis of genomes.
Glasner JD, Liss P, Plunkett G 3rd, Darling A, Prasad T, Rusch M, Byrnes A, Gilson M, Biehl B, Blattner FR, Perna NT. Glasner JD, et al. Nucleic Acids Res. 2003 Jan 1;31(1):147-51. doi: 10.1093/nar/gkg125. Nucleic Acids Res. 2003. PMID: 12519969 Free PMC article.
Enteropathogen Resource Integration Center (ERIC): bioinformatics support for research on biodefense-relevant enterobacteria.
Glasner JD, Plunkett G 3rd, Anderson BD, Baumler DJ, Biehl BS, Burland V, Cabot EL, Darling AE, Mau B, Neeno-Eckwall EC, Pot D, Qiu Y, Rissman AI, Worzella S, Zaremba S, Fedorko J, Hampton T, Liss P, Rusch M, Shaker M, Shaull L, Shetty P, Thotakura S, Whitmore J, Blattner FR, Greene JM, Perna NT. Glasner JD, et al. Nucleic Acids Res. 2008 Jan;36(Database issue):D519-23. doi: 10.1093/nar/gkm973. Epub 2007 Nov 13. Nucleic Acids Res. 2008. PMID: 17999997 Free PMC article.
Reordering contigs of draft genomes using the Mauve aligner.
Rissman AI, Mau B, Biehl BS, Darling AE, Glasner JD, Perna NT. Rissman AI, et al. Among authors: glasner jd. Bioinformatics. 2009 Aug 15;25(16):2071-3. doi: 10.1093/bioinformatics/btp356. Epub 2009 Jun 10. Bioinformatics. 2009. PMID: 19515959 Free PMC article.
Genome sequence of the plant-pathogenic bacterium Dickeya dadantii 3937.
Glasner JD, Yang CH, Reverchon S, Hugouvieux-Cotte-Pattat N, Condemine G, Bohin JP, Van Gijsegem F, Yang S, Franza T, Expert D, Plunkett G 3rd, San Francisco MJ, Charkowski AO, Py B, Bell K, Rauscher L, Rodriguez-Palenzuela P, Toussaint A, Holeva MC, He SY, Douet V, Boccara M, Blanco C, Toth I, Anderson BD, Biehl BS, Mau B, Flynn SM, Barras F, Lindeberg M, Birch PR, Tsuyumu S, Shi X, Hibbing M, Yap MN, Carpentier M, Dassa E, Umehara M, Kim JF, Rusch M, Soni P, Mayhew GF, Fouts DE, Gill SR, Blattner FR, Keen NT, Perna NT. Glasner JD, et al. J Bacteriol. 2011 Apr;193(8):2076-7. doi: 10.1128/JB.01513-10. Epub 2011 Jan 7. J Bacteriol. 2011. PMID: 21217001 Free PMC article.
48 results