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GSuite HyperBrowser: integrative analysis of dataset collections across the genome and epigenome.
Simovski B, Vodák D, Gundersen S, Domanska D, Azab A, Holden L, Holden M, Grytten I, Rand K, Drabløs F, Johansen M, Mora A, Lund-Andersen C, Fromm B, Eskeland R, Gabrielsen OS, Ferkingstad E, Nakken S, Bengtsen M, Nederbragt AJ, Thorarensen HS, Akse JA, Glad I, Hovig E, Sandve GK. Simovski B, et al. Among authors: grytten i. Gigascience. 2017 Jul 1;6(7):1-12. doi: 10.1093/gigascience/gix032. Gigascience. 2017. PMID: 28459977 Free PMC article.
Coordinates and intervals in graph-based reference genomes.
Rand KD, Grytten I, Nederbragt AJ, Storvik GO, Glad IK, Sandve GK. Rand KD, et al. Among authors: grytten i. BMC Bioinformatics. 2017 May 18;18(1):263. doi: 10.1186/s12859-017-1678-9. BMC Bioinformatics. 2017. PMID: 28521770 Free PMC article.
Ten simple rules for quick and dirty scientific programming.
Balaban G, Grytten I, Rand KD, Scheffer L, Sandve GK. Balaban G, et al. Among authors: grytten i. PLoS Comput Biol. 2021 Mar 11;17(3):e1008549. doi: 10.1371/journal.pcbi.1008549. eCollection 2021 Mar. PLoS Comput Biol. 2021. PMID: 33705383 Free PMC article. No abstract available.
The immuneML ecosystem for machine learning analysis of adaptive immune receptor repertoires.
Pavlović M, Scheffer L, Motwani K, Kanduri C, Kompova R, Vazov N, Waagan K, Bernal FLM, Costa AA, Corrie B, Akbar R, Al Hajj GS, Balaban G, Brusko TM, Chernigovskaya M, Christley S, Cowell LG, Frank R, Grytten I, Gundersen S, Haff IH, Hovig E, Hsieh PH, Klambauer G, Kuijjer ML, Lund-Andersen C, Martini A, Minotto T, Pensar J, Rand K, Riccardi E, Robert PA, Rocha A, Slabodkin A, Snapkov I, Sollid LM, Titov D, Weber CR, Widrich M, Yaari G, Greiff V, Sandve GK. Pavlović M, et al. Among authors: grytten i. Nat Mach Intell. 2021 Nov;3(11):936-944. doi: 10.1038/s42256-021-00413-z. Epub 2021 Nov 16. Nat Mach Intell. 2021. PMID: 37396030 Free PMC article.