Haapa-Paananen S - Search Results

1

Protein lysate microarray analysis to identify microRNAs regulating estrogen receptor signaling in breast cancer cell lines.

Leivonen SK, Mäkelä R, Ostling P, Kohonen P, Haapa-Paananen S, Kleivi K, Enerly E, Aakula A, Hellström K, Sahlberg N, Kristensen VN, Børresen-Dale AL, Saviranta P, Perälä M, Kallioniemi O. Leivonen SK, et al. Oncogene. 2009 Nov 5;28(44):3926-36. doi: 10.1038/onc.2009.241. Epub 2009 Aug 17. Oncogene. 2009. PMID: 19684618

2

HES6 gene is selectively overexpressed in glioma and represents an important transcriptional regulator of glioma proliferation.

Haapa-Paananen S, Kiviluoto S, Waltari M, Puputti M, Mpindi JP, Kohonen P, Tynninen O, Haapasalo H, Joensuu H, Perälä M, Kallioniemi O. Haapa-Paananen S, et al. Oncogene. 2012 Mar 8;31(10):1299-310. doi: 10.1038/onc.2011.316. Epub 2011 Jul 25. Oncogene. 2012. PMID: 21785461

3

Inhibition of the mitochondrial pyrimidine biosynthesis enzyme dihydroorotate dehydrogenase by doxorubicin and brequinar sensitizes cancer cells to TRAIL-induced apoptosis.

He T, Haapa-Paananen S, Kaminskyy VO, Kohonen P, Fey V, Zhivotovsky B, Kallioniemi O, Perälä M. He T, et al. Oncogene. 2014 Jul 3;33(27):3538-49. doi: 10.1038/onc.2013.313. Epub 2013 Sep 9. Oncogene. 2014. PMID: 24013224

4

Functional profiling of precursor MicroRNAs identifies MicroRNAs essential for glioma proliferation.

Haapa-Paananen S, Chen P, Hellström K, Kohonen P, Hautaniemi S, Kallioniemi O, Perälä M. Haapa-Paananen S, et al. PLoS One. 2013;8(4):e60930. doi: 10.1371/journal.pone.0060930. Epub 2013 Apr 5. PLoS One. 2013. PMID: 23577178 Free PMC article.

5

Identification of target genes in laryngeal squamous cell carcinoma by high-resolution copy number and gene expression microarray analyses.

Järvinen AK, Autio R, Haapa-Paananen S, Wolf M, Saarela M, Grénman R, Leivo I, Kallioniemi O, Mäkitie AA, Monni O. Järvinen AK, et al. Oncogene. 2006 Nov 2;25(52):6997-7008. doi: 10.1038/sj.onc.1209690. Epub 2006 May 22. Oncogene. 2006. PMID: 16715129

6

GTI: a novel algorithm for identifying outlier gene expression profiles from integrated microarray datasets.

Mpindi JP, Sara H, Haapa-Paananen S, Kilpinen S, Pisto T, Bucher E, Ojala K, Iljin K, Vainio P, Björkman M, Gupta S, Kohonen P, Nees M, Kallioniemi O. Mpindi JP, et al. PLoS One. 2011 Feb 18;6(2):e17259. doi: 10.1371/journal.pone.0017259. PLoS One. 2011. PMID: 21365010 Free PMC article.

7

Systematic bioinformatic analysis of expression levels of 17,330 human genes across 9,783 samples from 175 types of healthy and pathological tissues.

Kilpinen S, Autio R, Ojala K, Iljin K, Bucher E, Sara H, Pisto T, Saarela M, Skotheim RI, Björkman M, Mpindi JP, Haapa-Paananen S, Vainio P, Edgren H, Wolf M, Astola J, Nees M, Hautaniemi S, Kallioniemi O. Kilpinen S, et al. Genome Biol. 2008;9(9):R139. doi: 10.1186/gb-2008-9-9-r139. Epub 2008 Sep 19. Genome Biol. 2008. PMID: 18803840 Free PMC article.

8

Interactions between Notch- and hypoxia-induced transcriptomes in embryonic stem cells.

Main H, Lee KL, Yang H, Haapa-Paananen S, Edgren H, Jin S, Sahlgren C, Kallioniemi O, Poellinger L, Lim B, Lendahl U. Main H, et al. Exp Cell Res. 2010 May 15;316(9):1610-24. doi: 10.1016/j.yexcr.2009.12.012. Epub 2009 Dec 23. Exp Cell Res. 2010. PMID: 20034489

9

High-throughput RNAi screen in Ewing sarcoma cells identifies leucine rich repeats and WD repeat domain containing 1 (LRWD1) as a regulator of EWS-FLI1 driven cell viability.

He T, Surdez D, Rantala JK, Haapa-Paananen S, Ban J, Kauer M, Tomazou E, Fey V, Alonso J, Kovar H, Delattre O, Iljin K. He T, et al. Among authors: haapa paananen s. Gene. 2017 Jan 5;596:137-146. doi: 10.1016/j.gene.2016.10.021. Epub 2016 Oct 17. Gene. 2017. PMID: 27760381

10

Large-scale data integration framework provides a comprehensive view on glioblastoma multiforme.

Ovaska K, Laakso M, Haapa-Paananen S, Louhimo R, Chen P, Aittomäki V, Valo E, Núñez-Fontarnau J, Rantanen V, Karinen S, Nousiainen K, Lahesmaa-Korpinen AM, Miettinen M, Saarinen L, Kohonen P, Wu J, Westermarck J, Hautaniemi S. Ovaska K, et al. Genome Med. 2010 Sep 7;2(9):65. doi: 10.1186/gm186. Genome Med. 2010. PMID: 20822536 Free PMC article.

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