Hardison R - Search Results

1

The 3D Genome Browser: a web-based browser for visualizing 3D genome organization and long-range chromatin interactions.

Wang Y, Song F, Zhang B, Zhang L, Xu J, Kuang D, Li D, Choudhary MNK, Li Y, Hu M, Hardison R, Wang T, Yue F. Wang Y, et al. Among authors: hardison r. Genome Biol. 2018 Oct 4;19(1):151. doi: 10.1186/s13059-018-1519-9. Genome Biol. 2018. PMID: 30286773 Free PMC article.

2

Localization of the alpha-like globin gene cluster to region q12 of rabbit chromosome 6 by in situ hybridization.

Xu J, Hardison RC. Xu J, et al. Among authors: hardison rc. Genomics. 1991 Feb;9(2):362-5. doi: 10.1016/0888-7543(91)90265-g. Genomics. 1991. PMID: 2004787

3

Localization of the beta-like globin gene cluster and the genes for parathyroid hormone and c-Harvey-ras 1 to region q14----q21 of rabbit chromosome 1 by in situ hybridization.

Xu J, Hardison RC. Xu J, et al. Among authors: hardison rc. Cytogenet Cell Genet. 1989;52(3-4):157-61. doi: 10.1159/000132868. Cytogenet Cell Genet. 1989. PMID: 2698321

4

GALA, a database for genomic sequence alignments and annotations.

Giardine B, Elnitski L, Riemer C, Makalowska I, Schwartz S, Miller W, Hardison RC. Giardine B, et al. Genome Res. 2003 Apr;13(4):732-41. doi: 10.1101/gr.603103. Genome Res. 2003. PMID: 12671007 Free PMC article.

5

Patterns of insertions and their covariation with substitutions in the rat, mouse, and human genomes.

Yang S, Smit AF, Schwartz S, Chiaromonte F, Roskin KM, Haussler D, Miller W, Hardison RC. Yang S, et al. Genome Res. 2004 Apr;14(4):517-27. doi: 10.1101/gr.1984404. Genome Res. 2004. PMID: 15059992 Free PMC article.

6

Galaxy: a platform for interactive large-scale genome analysis.

Giardine B, Riemer C, Hardison RC, Burhans R, Elnitski L, Shah P, Zhang Y, Blankenberg D, Albert I, Taylor J, Miller W, Kent WJ, Nekrutenko A. Giardine B, et al. Among authors: hardison rc. Genome Res. 2005 Oct;15(10):1451-5. doi: 10.1101/gr.4086505. Epub 2005 Sep 16. Genome Res. 2005. PMID: 16169926 Free PMC article.

7

Experimental validation of predicted mammalian erythroid cis-regulatory modules.

Wang H, Zhang Y, Cheng Y, Zhou Y, King DC, Taylor J, Chiaromonte F, Kasturi J, Petrykowska H, Gibb B, Dorman C, Miller W, Dore LC, Welch J, Weiss MJ, Hardison RC. Wang H, et al. Genome Res. 2006 Dec;16(12):1480-92. doi: 10.1101/gr.5353806. Epub 2006 Oct 12. Genome Res. 2006. PMID: 17038566 Free PMC article.

8

Finding cis-regulatory elements using comparative genomics: some lessons from ENCODE data.

King DC, Taylor J, Zhang Y, Cheng Y, Lawson HA, Martin J; ENCODE groups for Transcriptional Regulation and Multispecies Sequence Analysis; Chiaromonte F, Miller W, Hardison RC. King DC, et al. Genome Res. 2007 Jun;17(6):775-86. doi: 10.1101/gr.5592107. Genome Res. 2007. PMID: 17567996 Free PMC article.

9

A framework for collaborative analysis of ENCODE data: making large-scale analyses biologist-friendly.

Blankenberg D, Taylor J, Schenck I, He J, Zhang Y, Ghent M, Veeraraghavan N, Albert I, Miller W, Makova KD, Hardison RC, Nekrutenko A. Blankenberg D, et al. Genome Res. 2007 Jun;17(6):960-4. doi: 10.1101/gr.5578007. Genome Res. 2007. PMID: 17568012 Free PMC article.

10

28-way vertebrate alignment and conservation track in the UCSC Genome Browser.

Miller W, Rosenbloom K, Hardison RC, Hou M, Taylor J, Raney B, Burhans R, King DC, Baertsch R, Blankenberg D, Kosakovsky Pond SL, Nekrutenko A, Giardine B, Harris RS, Tyekucheva S, Diekhans M, Pringle TH, Murphy WJ, Lesk A, Weinstock GM, Lindblad-Toh K, Gibbs RA, Lander ES, Siepel A, Haussler D, Kent WJ. Miller W, et al. Among authors: hardison rc. Genome Res. 2007 Dec;17(12):1797-808. doi: 10.1101/gr.6761107. Epub 2007 Nov 5. Genome Res. 2007. PMID: 17984227 Free PMC article.

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