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Page 1
Recommendations for biomarker identification and qualification in clinical proteomics.
Mischak H, Allmaier G, Apweiler R, Attwood T, Baumann M, Benigni A, Bennett SE, Bischoff R, Bongcam-Rudloff E, Capasso G, Coon JJ, D'Haese P, Dominiczak AF, Dakna M, Dihazi H, Ehrich JH, Fernandez-Llama P, Fliser D, Frokiaer J, Garin J, Girolami M, Hancock WS, Haubitz M, Hochstrasser D, Holman RR, Ioannidis JP, Jankowski J, Julian BA, Klein JB, Kolch W, Luider T, Massy Z, Mattes WB, Molina F, Monsarrat B, Novak J, Peter K, Rossing P, Sánchez-Carbayo M, Schanstra JP, Semmes OJ, Spasovski G, Theodorescu D, Thongboonkerd V, Vanholder R, Veenstra TD, Weissinger E, Yamamoto T, Vlahou A. Mischak H, et al. Among authors: hochstrasser d, d haese p. Sci Transl Med. 2010 Aug 25;2(46):46ps42. doi: 10.1126/scitranslmed.3001249. Sci Transl Med. 2010. PMID: 20739680
Clinical proteomics: A need to define the field and to begin to set adequate standards.
Mischak H, Apweiler R, Banks RE, Conaway M, Coon J, Dominiczak A, Ehrich JH, Fliser D, Girolami M, Hermjakob H, Hochstrasser D, Jankowski J, Julian BA, Kolch W, Massy ZA, Neusuess C, Novak J, Peter K, Rossing K, Schanstra J, Semmes OJ, Theodorescu D, Thongboonkerd V, Weissinger EM, Van Eyk JE, Yamamoto T. Mischak H, et al. Among authors: hochstrasser d. Proteomics Clin Appl. 2007 Feb;1(2):148-56. doi: 10.1002/prca.200600771. Epub 2007 Jan 22. Proteomics Clin Appl. 2007. PMID: 21136664
Proteomics in clinical chemistry: will it be long?
Lescuyer P, Farina A, Hochstrasser DF. Lescuyer P, et al. Trends Biotechnol. 2010 May;28(5):225-9. doi: 10.1016/j.tibtech.2010.02.004. Epub 2010 Mar 30. Trends Biotechnol. 2010. PMID: 20359762
Quantitative Clinical Chemistry Proteomics (qCCP) using mass spectrometry: general characteristics and application.
Lehmann S, Hoofnagle A, Hochstrasser D, Brede C, Glueckmann M, Cocho JA, Ceglarek U, Lenz C, Vialaret J, Scherl A, Hirtz C; IFCC Working Group on Clinical Quantitative Mass Spectrometry Proteomics (WG-cMSP). Lehmann S, et al. Among authors: hochstrasser d. Clin Chem Lab Med. 2013 May;51(5):919-35. doi: 10.1515/cclm-2012-0723. Clin Chem Lab Med. 2013. PMID: 23183755 Free article. Review.
How shall we use the proteomics toolbox for biomarker discovery?
Lescuyer P, Hochstrasser D, Rabilloud T. Lescuyer P, et al. Among authors: hochstrasser d. J Proteome Res. 2007 Sep;6(9):3371-6. doi: 10.1021/pr0702060. Epub 2007 Jul 27. J Proteome Res. 2007. PMID: 17655344 Free article.
The human proteome project: current state and future direction.
Legrain P, Aebersold R, Archakov A, Bairoch A, Bala K, Beretta L, Bergeron J, Borchers CH, Corthals GL, Costello CE, Deutsch EW, Domon B, Hancock W, He F, Hochstrasser D, Marko-Varga G, Salekdeh GH, Sechi S, Snyder M, Srivastava S, Uhlén M, Wu CH, Yamamoto T, Paik YK, Omenn GS. Legrain P, et al. Among authors: hochstrasser d. Mol Cell Proteomics. 2011 Jul;10(7):M111.009993. doi: 10.1074/mcp.M111.009993. Mol Cell Proteomics. 2011. PMID: 21742803 Free PMC article.
Human Proteinpedia enables sharing of human protein data.
Mathivanan S, Ahmed M, Ahn NG, Alexandre H, Amanchy R, Andrews PC, Bader JS, Balgley BM, Bantscheff M, Bennett KL, Björling E, Blagoev B, Bose R, Brahmachari SK, Burlingame AS, Bustelo XR, Cagney G, Cantin GT, Cardasis HL, Celis JE, Chaerkady R, Chu F, Cole PA, Costello CE, Cotter RJ, Crockett D, DeLany JP, De Marzo AM, DeSouza LV, Deutsch EW, Dransfield E, Drewes G, Droit A, Dunn MJ, Elenitoba-Johnson K, Ewing RM, Van Eyk J, Faca V, Falkner J, Fang X, Fenselau C, Figeys D, Gagné P, Gelfi C, Gevaert K, Gimble JM, Gnad F, Goel R, Gromov P, Hanash SM, Hancock WS, Harsha HC, Hart G, Hays F, He F, Hebbar P, Helsens K, Hermeking H, Hide W, Hjernø K, Hochstrasser DF, Hofmann O, Horn DM, Hruban RH, Ibarrola N, James P, Jensen ON, Jensen PH, Jung P, Kandasamy K, Kheterpal I, Kikuno RF, Korf U, Körner R, Kuster B, Kwon MS, Lee HJ, Lee YJ, Lefevre M, Lehvaslaiho M, Lescuyer P, Levander F, Lim MS, Löbke C, Loo JA, Mann M, Martens L, Martinez-Heredia J, McComb M, McRedmond J, Mehrle A, Menon R, Miller CA, Mischak H, Mohan SS, Mohmood R, Molina H, Moran MF, Morgan JD, Moritz R, Morzel M, Muddiman DC, Nalli A, Navarro JD, Neubert TA, Ohara O, Oliva R, Omenn GS, Oyama M, Paik YK, Penningt… See abstract for full author list ➔ Mathivanan S, et al. Among authors: hochstrasser df. Nat Biotechnol. 2008 Feb;26(2):164-7. doi: 10.1038/nbt0208-164. Nat Biotechnol. 2008. PMID: 18259167 Free article. No abstract available.
The Chromosome-Centric Human Proteome Project for cataloging proteins encoded in the genome.
Paik YK, Jeong SK, Omenn GS, Uhlen M, Hanash S, Cho SY, Lee HJ, Na K, Choi EY, Yan F, Zhang F, Zhang Y, Snyder M, Cheng Y, Chen R, Marko-Varga G, Deutsch EW, Kim H, Kwon JY, Aebersold R, Bairoch A, Taylor AD, Kim KY, Lee EY, Hochstrasser D, Legrain P, Hancock WS. Paik YK, et al. Among authors: hochstrasser d. Nat Biotechnol. 2012 Mar 7;30(3):221-3. doi: 10.1038/nbt.2152. Nat Biotechnol. 2012. PMID: 22398612 No abstract available.
Industrial-scale proteomics: from liters of plasma to chemically synthesized proteins.
Rose K, Bougueleret L, Baussant T, Böhm G, Botti P, Colinge J, Cusin I, Gaertner H, Gleizes A, Heller M, Jimenez S, Johnson A, Kussmann M, Menin L, Menzel C, Ranno F, Rodriguez-Tomé P, Rogers J, Saudrais C, Villain M, Wetmore D, Bairoch A, Hochstrasser D. Rose K, et al. Among authors: hochstrasser d. Proteomics. 2004 Jul;4(7):2125-50. doi: 10.1002/pmic.200300718. Proteomics. 2004. PMID: 15221774
306 results