Holmes EC - Search Results

1

Temporally structured metapopulation dynamics and persistence of influenza A H3N2 virus in humans.

Bahl J, Nelson MI, Chan KH, Chen R, Vijaykrishna D, Halpin RA, Stockwell TB, Lin X, Wentworth DE, Ghedin E, Guan Y, Peiris JS, Riley S, Rambaut A, Holmes EC, Smith GJ. Bahl J, et al. Among authors: holmes ec. Proc Natl Acad Sci U S A. 2011 Nov 29;108(48):19359-64. doi: 10.1073/pnas.1109314108. Epub 2011 Nov 14. Proc Natl Acad Sci U S A. 2011. PMID: 22084096 Free PMC article.

2

Revealing the history of infectious disease epidemics through phylogenetic trees.

Holmes EC, Nee S, Rambaut A, Garnett GP, Harvey PH. Holmes EC, et al. Philos Trans R Soc Lond B Biol Sci. 1995 Jul 29;349(1327):33-40. doi: 10.1098/rstb.1995.0088. Philos Trans R Soc Lond B Biol Sci. 1995. PMID: 8748017

3

Recombination between sequences of hepatitis B virus from different genotypes.

Bollyky PL, Rambaut A, Harvey PH, Holmes EC. Bollyky PL, et al. Among authors: holmes ec. J Mol Evol. 1996 Feb;42(2):97-102. doi: 10.1007/BF02198834. J Mol Evol. 1996. PMID: 8919861

4

Phylogenetic evidence for recombination in dengue virus.

Holmes EC, Worobey M, Rambaut A. Holmes EC, et al. Mol Biol Evol. 1999 Mar;16(3):405-9. doi: 10.1093/oxfordjournals.molbev.a026121. Mol Biol Evol. 1999. PMID: 10331266

5

Widespread intra-serotype recombination in natural populations of dengue virus.

Worobey M, Rambaut A, Holmes EC. Worobey M, et al. Among authors: holmes ec. Proc Natl Acad Sci U S A. 1999 Jun 22;96(13):7352-7. doi: 10.1073/pnas.96.13.7352. Proc Natl Acad Sci U S A. 1999. PMID: 10377418 Free PMC article.

6

The epidemic behavior of the hepatitis C virus.

Pybus OG, Charleston MA, Gupta S, Rambaut A, Holmes EC, Harvey PH. Pybus OG, et al. Among authors: holmes ec. Science. 2001 Jun 22;292(5525):2323-5. doi: 10.1126/science.1058321. Science. 2001. PMID: 11423661

7

Rates of molecular evolution in RNA viruses: a quantitative phylogenetic analysis.

Jenkins GM, Rambaut A, Pybus OG, Holmes EC. Jenkins GM, et al. Among authors: holmes ec. J Mol Evol. 2002 Feb;54(2):156-65. doi: 10.1007/s00239-001-0064-3. J Mol Evol. 2002. PMID: 11821909

8

Inferring the rate and time-scale of dengue virus evolution.

Twiddy SS, Holmes EC, Rambaut A. Twiddy SS, et al. Among authors: holmes ec. Mol Biol Evol. 2003 Jan;20(1):122-9. doi: 10.1093/molbev/msg010. Mol Biol Evol. 2003. PMID: 12519914

9

New inferences from tree shape: numbers of missing taxa and population growth rates.

Pybus OG, Rambaut A, Holmes EC, Harvey PH. Pybus OG, et al. Among authors: holmes ec. Syst Biol. 2002 Dec;51(6):881-8. doi: 10.1080/10635150290102582. Syst Biol. 2002. PMID: 12554454

10

The causes and consequences of HIV evolution.

Rambaut A, Posada D, Crandall KA, Holmes EC. Rambaut A, et al. Among authors: holmes ec. Nat Rev Genet. 2004 Jan;5(1):52-61. doi: 10.1038/nrg1246. Nat Rev Genet. 2004. PMID: 14708016 Review. No abstract available.

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