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COPASI--a COmplex PAthway SImulator.
Hoops S, Sahle S, Gauges R, Lee C, Pahle J, Simus N, Singhal M, Xu L, Mendes P, Kummer U. Hoops S, et al. Bioinformatics. 2006 Dec 15;22(24):3067-74. doi: 10.1093/bioinformatics/btl485. Epub 2006 Oct 10. Bioinformatics. 2006. PMID: 17032683
COPASI and its applications in biotechnology.
Bergmann FT, Hoops S, Klahn B, Kummer U, Mendes P, Pahle J, Sahle S. Bergmann FT, et al. Among authors: hoops s. J Biotechnol. 2017 Nov 10;261:215-220. doi: 10.1016/j.jbiotec.2017.06.1200. Epub 2017 Jun 24. J Biotechnol. 2017. PMID: 28655634 Free PMC article. Review.
The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 2 Core Release 2.
Hucka M, Bergmann FT, Chaouiya C, Dräger A, Hoops S, Keating SM, König M, Novère NL, Myers CJ, Olivier BG, Sahle S, Schaff JC, Sheriff R, Smith LP, Waltemath D, Wilkinson DJ, Zhang F. Hucka M, et al. Among authors: hoops s. J Integr Bioinform. 2019 Jun 20;16(2):20190021. doi: 10.1515/jib-2019-0021. J Integr Bioinform. 2019. PMID: 31219795 Free PMC article.
A new strategy for assessing sensitivities in biochemical models.
Sahle S, Mendes P, Hoops S, Kummer U. Sahle S, et al. Among authors: hoops s. Philos Trans A Math Phys Eng Sci. 2008 Oct 13;366(1880):3619-31. doi: 10.1098/rsta.2008.0108. Philos Trans A Math Phys Eng Sci. 2008. PMID: 18632455 Free PMC article.
94 results