Ji H - Search Results

1

Hierarchy in somatic mutations arising during genomic evolution and progression of follicular lymphoma.

Green MR, Gentles AJ, Nair RV, Irish JM, Kihira S, Liu CL, Kela I, Hopmans ES, Myklebust JH, Ji H, Plevritis SK, Levy R, Alizadeh AA. Green MR, et al. Among authors: ji h. Blood. 2013 Feb 28;121(9):1604-11. doi: 10.1182/blood-2012-09-457283. Epub 2013 Jan 7. Blood. 2013. PMID: 23297126 Free PMC article.

2

Targeted deep resequencing of the human cancer genome using next-generation technologies.

Myllykangas S, Ji HP. Myllykangas S, et al. Biotechnol Genet Eng Rev. 2010;27:135-58. doi: 10.1080/02648725.2010.10648148. Biotechnol Genet Eng Rev. 2010. PMID: 21415896 Free PMC article. Review.

3

A cross-sample statistical model for SNP detection in short-read sequencing data.

Muralidharan O, Natsoulis G, Bell J, Newburger D, Xu H, Kela I, Ji H, Zhang N. Muralidharan O, et al. Among authors: ji h. Nucleic Acids Res. 2012 Jan;40(1):e5. doi: 10.1093/nar/gkr851. Epub 2011 Nov 7. Nucleic Acids Res. 2012. PMID: 22064853 Free PMC article.

4

RVD: a command-line program for ultrasensitive rare single nucleotide variant detection using targeted next-generation DNA resequencing.

Cushing A, Flaherty P, Hopmans E, Bell JM, Ji HP. Cushing A, et al. BMC Res Notes. 2013 May 23;6:206. doi: 10.1186/1756-0500-6-206. BMC Res Notes. 2013. PMID: 23701658 Free PMC article.

5

A programmable method for massively parallel targeted sequencing.

Hopmans ES, Natsoulis G, Bell JM, Grimes SM, Sieh W, Ji HP. Hopmans ES, et al. Nucleic Acids Res. 2014 Jun;42(10):e88. doi: 10.1093/nar/gku282. Epub 2014 Apr 29. Nucleic Acids Res. 2014. PMID: 24782526 Free PMC article.

6

Oncogenic transformation of diverse gastrointestinal tissues in primary organoid culture.

Li X, Nadauld L, Ootani A, Corney DC, Pai RK, Gevaert O, Cantrell MA, Rack PG, Neal JT, Chan CW, Yeung T, Gong X, Yuan J, Wilhelmy J, Robine S, Attardi LD, Plevritis SK, Hung KE, Chen CZ, Ji HP, Kuo CJ. Li X, et al. Nat Med. 2014 Jul;20(7):769-77. doi: 10.1038/nm.3585. Epub 2014 May 25. Nat Med. 2014. PMID: 24859528 Free PMC article.

7

Emergence of Hemagglutinin Mutations During the Course of Influenza Infection.

Cushing A, Kamali A, Winters M, Hopmans ES, Bell JM, Grimes SM, Xia LC, Zhang NR, Moss RB, Holodniy M, Ji HP. Cushing A, et al. Sci Rep. 2015 Nov 5;5:16178. doi: 10.1038/srep16178. Sci Rep. 2015. PMID: 26538451 Free PMC article. Clinical Trial.

8

Haplotyping germline and cancer genomes with high-throughput linked-read sequencing.

Zheng GX, Lau BT, Schnall-Levin M, Jarosz M, Bell JM, Hindson CM, Kyriazopoulou-Panagiotopoulou S, Masquelier DA, Merrill L, Terry JM, Mudivarti PA, Wyatt PW, Bharadwaj R, Makarewicz AJ, Li Y, Belgrader P, Price AD, Lowe AJ, Marks P, Vurens GM, Hardenbol P, Montesclaros L, Luo M, Greenfield L, Wong A, Birch DE, Short SW, Bjornson KP, Patel P, Hopmans ES, Wood C, Kaur S, Lockwood GK, Stafford D, Delaney JP, Wu I, Ordonez HS, Grimes SM, Greer S, Lee JY, Belhocine K, Giorda KM, Heaton WH, McDermott GP, Bent ZW, Meschi F, Kondov NO, Wilson R, Bernate JA, Gauby S, Kindwall A, Bermejo C, Fehr AN, Chan A, Saxonov S, Ness KD, Hindson BJ, Ji HP. Zheng GX, et al. Among authors: ji hp. Nat Biotechnol. 2016 Mar;34(3):303-11. doi: 10.1038/nbt.3432. Epub 2016 Feb 1. Nat Biotechnol. 2016. PMID: 26829319 Free PMC article.

9

A genome-wide approach for detecting novel insertion-deletion variants of mid-range size.

Xia LC, Sakshuwong S, Hopmans ES, Bell JM, Grimes SM, Siegmund DO, Ji HP, Zhang NR. Xia LC, et al. Nucleic Acids Res. 2016 Sep 6;44(15):e126. doi: 10.1093/nar/gkw481. Epub 2016 Jun 20. Nucleic Acids Res. 2016. PMID: 27325742 Free PMC article.

10

Linked read sequencing resolves complex genomic rearrangements in gastric cancer metastases.

Greer SU, Nadauld LD, Lau BT, Chen J, Wood-Bouwens C, Ford JM, Kuo CJ, Ji HP. Greer SU, et al. Genome Med. 2017 Jun 19;9(1):57. doi: 10.1186/s13073-017-0447-8. Genome Med. 2017. PMID: 28629429 Free PMC article.

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