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IVT-seq reveals extreme bias in RNA sequencing.
Lahens NF, Kavakli IH, Zhang R, Hayer K, Black MB, Dueck H, Pizarro A, Kim J, Irizarry R, Thomas RS, Grant GR, Hogenesch JB. Lahens NF, et al. Among authors: kavakli ih. Genome Biol. 2014 Jun 30;15(6):R86. doi: 10.1186/gb-2014-15-6-r86. Genome Biol. 2014. PMID: 24981968 Free PMC article.
Machine learning helps identify CHRONO as a circadian clock component.
Anafi RC, Lee Y, Sato TK, Venkataraman A, Ramanathan C, Kavakli IH, Hughes ME, Baggs JE, Growe J, Liu AC, Kim J, Hogenesch JB. Anafi RC, et al. Among authors: kavakli ih. PLoS Biol. 2014 Apr 15;12(4):e1001840. doi: 10.1371/journal.pbio.1001840. eCollection 2014 Apr. PLoS Biol. 2014. PMID: 24737000 Free PMC article.
Clock Regulation of Metabolites Reveals Coupling between Transcription and Metabolism.
Krishnaiah SY, Wu G, Altman BJ, Growe J, Rhoades SD, Coldren F, Venkataraman A, Olarerin-George AO, Francey LJ, Mukherjee S, Girish S, Selby CP, Cal S, Er U, Sianati B, Sengupta A, Anafi RC, Kavakli IH, Sancar A, Baur JA, Dang CV, Hogenesch JB, Weljie AM. Krishnaiah SY, et al. Among authors: kavakli ih. Cell Metab. 2017 Apr 4;25(4):961-974.e4. doi: 10.1016/j.cmet.2017.03.019. Cell Metab. 2017. PMID: 28380384 Free PMC article.
A novel BHLHE41 variant is associated with short sleep and resistance to sleep deprivation in humans.
Pellegrino R, Kavakli IH, Goel N, Cardinale CJ, Dinges DF, Kuna ST, Maislin G, Van Dongen HP, Tufik S, Hogenesch JB, Hakonarson H, Pack AI. Pellegrino R, et al. Among authors: kavakli ih. Sleep. 2014 Aug 1;37(8):1327-36. doi: 10.5665/sleep.3924. Sleep. 2014. PMID: 25083013 Free PMC article.
Thus, clock mechanisms are likely involved in setting sleep length and the magnitude of sleep homeostasis. CITATION: Pellegrino R, Kavakli IH, Goel N, Cardinale CJ, Dinges DF, Kuna ST, Maislin G, Van Dongen HP, Tufik S, Hogenesch JB, Hakonarson H, Pack AI. ...
Thus, clock mechanisms are likely involved in setting sleep length and the magnitude of sleep homeostasis. CITATION: Pellegrino R, Kavakl …
CRY1-CBS binding regulates circadian clock function and metabolism.
Cal-Kayitmazbatir S, Kulkoyluoglu-Cotul E, Growe J, Selby CP, Rhoades SD, Malik D, Oner H, Asimgil H, Francey LJ, Sancar A, Kruger WD, Hogenesch JB, Weljie A, Anafi RC, Kavakli IH. Cal-Kayitmazbatir S, et al. Among authors: kavakli ih. FEBS J. 2021 Jan;288(2):614-639. doi: 10.1111/febs.15360. Epub 2020 Jun 9. FEBS J. 2021. PMID: 32383312 Free PMC article.
Clock Regulation of Metabolites Reveals Coupling between Transcription and Metabolism.
Krishnaiah SY, Wu G, Altman BJ, Growe J, Rhoades SD, Coldren F, Venkataraman A, Olarerin-George AO, Francey LJ, Mukherjee S, Girish S, Selby CP, Cal S, Er U, Sianati B, Sengupta A, Anafi RC, Kavakli IH, Sancar A, Baur JA, Dang CV, Hogenesch JB, Weljie AM. Krishnaiah SY, et al. Among authors: kavakli ih. Cell Metab. 2017 May 2;25(5):1206. doi: 10.1016/j.cmet.2017.04.023. Cell Metab. 2017. PMID: 28467936 Free article. No abstract available.
Circadian photoreception in humans and mice.
Kavakli IH, Sancar A. Kavakli IH, et al. Mol Interv. 2002 Dec;2(8):484-92. doi: 10.1124/mi.2.8.484. Mol Interv. 2002. PMID: 14993400 Review.
75 results