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Cap analysis gene expression for high-throughput analysis of transcriptional starting point and identification of promoter usage.
Shiraki T, Kondo S, Katayama S, Waki K, Kasukawa T, Kawaji H, Kodzius R, Watahiki A, Nakamura M, Arakawa T, Fukuda S, Sasaki D, Podhajska A, Harbers M, Kawai J, Carninci P, Hayashizaki Y. Shiraki T, et al. Among authors: kawai j. Proc Natl Acad Sci U S A. 2003 Dec 23;100(26):15776-81. doi: 10.1073/pnas.2136655100. Epub 2003 Dec 8. Proc Natl Acad Sci U S A. 2003. PMID: 14663149 Free PMC article.
Genome-wide analysis of mammalian promoter architecture and evolution.
Carninci P, Sandelin A, Lenhard B, Katayama S, Shimokawa K, Ponjavic J, Semple CA, Taylor MS, Engström PG, Frith MC, Forrest AR, Alkema WB, Tan SL, Plessy C, Kodzius R, Ravasi T, Kasukawa T, Fukuda S, Kanamori-Katayama M, Kitazume Y, Kawaji H, Kai C, Nakamura M, Konno H, Nakano K, Mottagui-Tabar S, Arner P, Chesi A, Gustincich S, Persichetti F, Suzuki H, Grimmond SM, Wells CA, Orlando V, Wahlestedt C, Liu ET, Harbers M, Kawai J, Bajic VB, Hume DA, Hayashizaki Y. Carninci P, et al. Among authors: kawai j. Nat Genet. 2006 Jun;38(6):626-35. doi: 10.1038/ng1789. Epub 2006 Apr 28. Nat Genet. 2006. PMID: 16645617
Functional annotation of a full-length Arabidopsis cDNA collection.
Seki M, Narusaka M, Kamiya A, Ishida J, Satou M, Sakurai T, Nakajima M, Enju A, Akiyama K, Oono Y, Muramatsu M, Hayashizaki Y, Kawai J, Carninci P, Itoh M, Ishii Y, Arakawa T, Shibata K, Shinagawa A, Shinozaki K. Seki M, et al. Among authors: kawai j. Science. 2002 Apr 5;296(5565):141-5. doi: 10.1126/science.1071006. Epub 2002 Mar 21. Science. 2002. PMID: 11910074
Targeting a complex transcriptome: the construction of the mouse full-length cDNA encyclopedia.
Carninci P, Waki K, Shiraki T, Konno H, Shibata K, Itoh M, Aizawa K, Arakawa T, Ishii Y, Sasaki D, Bono H, Kondo S, Sugahara Y, Saito R, Osato N, Fukuda S, Sato K, Watahiki A, Hirozane-Kishikawa T, Nakamura M, Shibata Y, Yasunishi A, Kikuchi N, Yoshiki A, Kusakabe M, Gustincich S, Beisel K, Pavan W, Aidinis V, Nakagawara A, Held WA, Iwata H, Kono T, Nakauchi H, Lyons P, Wells C, Hume DA, Fagiolini M, Hensch TK, Brinkmeier M, Camper S, Hirota J, Mombaerts P, Muramatsu M, Okazaki Y, Kawai J, Hayashizaki Y. Carninci P, et al. Among authors: kawai j. Genome Res. 2003 Jun;13(6B):1273-89. doi: 10.1101/gr.1119703. Genome Res. 2003. PMID: 12819125 Free PMC article.
DNA book.
Kawai J, Hayashizaki Y. Kawai J, et al. Genome Res. 2003 Jun;13(6B):1488-95. doi: 10.1101/gr.914203. Genome Res. 2003. PMID: 12819147 Free PMC article.
Subtraction of cap-trapped full-length cDNA libraries to select rare transcripts.
Hirozane-Kishikawa T, Shiraki T, Waki K, Nakamura M, Arakawa T, Kawai J, Fagiolini M, Hensch TK, Hayashizaki Y, Carninci P. Hirozane-Kishikawa T, et al. Among authors: kawai j. Biotechniques. 2003 Sep;35(3):510-6, 518. doi: 10.2144/03353st04. Biotechniques. 2003. PMID: 14513556 Free article.
Antisense transcripts with rice full-length cDNAs.
Osato N, Yamada H, Satoh K, Ooka H, Yamamoto M, Suzuki K, Kawai J, Carninci P, Ohtomo Y, Murakami K, Matsubara K, Kikuchi S, Hayashizaki Y. Osato N, et al. Among authors: kawai j. Genome Biol. 2003;5(1):R5. doi: 10.1186/gb-2003-5-1-r5. Epub 2003 Dec 11. Genome Biol. 2003. PMID: 14709177 Free PMC article.
396 results