Kilpinen S - Search Results

1

Systematic bioinformatic analysis of expression levels of 17,330 human genes across 9,783 samples from 175 types of healthy and pathological tissues.

Kilpinen S, Autio R, Ojala K, Iljin K, Bucher E, Sara H, Pisto T, Saarela M, Skotheim RI, Björkman M, Mpindi JP, Haapa-Paananen S, Vainio P, Edgren H, Wolf M, Astola J, Nees M, Hautaniemi S, Kallioniemi O. Kilpinen S, et al. Genome Biol. 2008;9(9):R139. doi: 10.1186/gb-2008-9-9-r139. Epub 2008 Sep 19. Genome Biol. 2008. PMID: 18803840 Free PMC article.

2

NMD microarray analysis for rapid genome-wide screen of mutated genes in cancer.

Wolf M, Edgren H, Muggerud A, Kilpinen S, Huusko P, Sørlie T, Mousses S, Kallioniemi O. Wolf M, et al. Among authors: kilpinen s. Cell Oncol. 2005;27(3):169-73. doi: 10.1155/2005/478316. Cell Oncol. 2005. PMID: 16037637 Free PMC article. Review.

3

TMPRSS2 fusions with oncogenic ETS factors in prostate cancer involve unbalanced genomic rearrangements and are associated with HDAC1 and epigenetic reprogramming.

Iljin K, Wolf M, Edgren H, Gupta S, Kilpinen S, Skotheim RI, Peltola M, Smit F, Verhaegh G, Schalken J, Nees M, Kallioniemi O. Iljin K, et al. Among authors: kilpinen s. Cancer Res. 2006 Nov 1;66(21):10242-6. doi: 10.1158/0008-5472.CAN-06-1986. Cancer Res. 2006. PMID: 17079440 Free article.

4

High-resolution copy number and gene expression microarray analyses of head and neck squamous cell carcinoma cell lines of tongue and larynx.

Järvinen AK, Autio R, Kilpinen S, Saarela M, Leivo I, Grénman R, Mäkitie AA, Monni O. Järvinen AK, et al. Among authors: kilpinen s. Genes Chromosomes Cancer. 2008 Jun;47(6):500-9. doi: 10.1002/gcc.20551. Genes Chromosomes Cancer. 2008. PMID: 18314910

5

Role of ErbB4 in breast cancer.

Sundvall M, Iljin K, Kilpinen S, Sara H, Kallioniemi OP, Elenius K. Sundvall M, et al. Among authors: kilpinen s. J Mammary Gland Biol Neoplasia. 2008 Jun;13(2):259-68. doi: 10.1007/s10911-008-9079-3. Epub 2008 May 3. J Mammary Gland Biol Neoplasia. 2008. PMID: 18454307 Review.

6

Application of active and kinase-deficient kinome collection for identification of kinases regulating hedgehog signaling.

Varjosalo M, Björklund M, Cheng F, Syvänen H, Kivioja T, Kilpinen S, Sun Z, Kallioniemi O, Stunnenberg HG, He WW, Ojala P, Taipale J. Varjosalo M, et al. Among authors: kilpinen s. Cell. 2008 May 2;133(3):537-48. doi: 10.1016/j.cell.2008.02.047. Cell. 2008. PMID: 18455992 Free article.

7

Comparison of Affymetrix data normalization methods using 6,926 experiments across five array generations.

Autio R, Kilpinen S, Saarela M, Kallioniemi O, Hautaniemi S, Astola J. Autio R, et al. Among authors: kilpinen s. BMC Bioinformatics. 2009 Jan 30;10 Suppl 1(Suppl 1):S24. doi: 10.1186/1471-2105-10-S1-S24. BMC Bioinformatics. 2009. PMID: 19208124 Free PMC article.

8

Array-based gene expression, CGH and tissue data defines a 12q24 gain in neuroblastic tumors with prognostic implication.

Wolf M, Korja M, Karhu R, Edgren H, Kilpinen S, Ojala K, Mousses S, Kallioniemi A, Haapasalo H. Wolf M, et al. Among authors: kilpinen s. BMC Cancer. 2010 May 5;10:181. doi: 10.1186/1471-2407-10-181. BMC Cancer. 2010. PMID: 20444257 Free PMC article.

9

Fibroblast growth factor receptor 4 regulates tumor invasion by coupling fibroblast growth factor signaling to extracellular matrix degradation.

Sugiyama N, Varjosalo M, Meller P, Lohi J, Hyytiäinen M, Kilpinen S, Kallioniemi O, Ingvarsen S, Engelholm LH, Taipale J, Alitalo K, Keski-Oja J, Lehti K. Sugiyama N, et al. Among authors: kilpinen s. Cancer Res. 2010 Oct 15;70(20):7851-61. doi: 10.1158/0008-5472.CAN-10-1223. Epub 2010 Sep 28. Cancer Res. 2010. PMID: 20876804

10

Integrative functional genomics analysis of sustained polyploidy phenotypes in breast cancer cells identifies an oncogenic profile for GINS2.

Rantala JK, Edgren H, Lehtinen L, Wolf M, Kleivi K, Vollan HK, Aaltola AR, Laasola P, Kilpinen S, Saviranta P, Iljin K, Kallioniemi O. Rantala JK, et al. Among authors: kilpinen s. Neoplasia. 2010 Nov;12(11):877-88. doi: 10.1593/neo.10548. Neoplasia. 2010. PMID: 21082043 Free PMC article.

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