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Determining the Quantitative Principles of T Cell Response to Antigenic Disparity in Stem Cell Transplantation.
Salman A, Koparde V, Hall CE, Jameson-Lee M, Roberts C, Serrano M, AbdulRazzaq B, Meier J, Kennedy C, Manjili MH, Spellman SR, Wijesinghe D, Hashmi S, Buck G, Qayyum R, Neale M, Reed J, Toor AA. Salman A, et al. Among authors: koparde v. Front Immunol. 2018 Oct 11;9:2284. doi: 10.3389/fimmu.2018.02284. eCollection 2018. Front Immunol. 2018. PMID: 30364159 Free PMC article. Review.
In silico Derivation of HLA-Specific Alloreactivity Potential from Whole Exome Sequencing of Stem-Cell Transplant Donors and Recipients: Understanding the Quantitative Immunobiology of Allogeneic Transplantation.
Jameson-Lee M, Koparde V, Griffith P, Scalora AF, Sampson JK, Khalid H, Sheth NU, Batalo M, Serrano MG, Roberts CH, Hess ML, Buck GA, Neale MC, Manjili MH, Toor AA. Jameson-Lee M, et al. Among authors: koparde v. Front Immunol. 2014 Nov 6;5:529. doi: 10.3389/fimmu.2014.00529. eCollection 2014. Front Immunol. 2014. PMID: 25414699 Free PMC article. Review.
Stem cell transplantation as a dynamical system: are clinical outcomes deterministic?
Toor AA, Kobulnicky JD, Salman S, Roberts CH, Jameson-Lee M, Meier J, Scalora A, Sheth N, Koparde V, Serrano M, Buck GA, Clark WB, McCarty JM, Chung HM, Manjili MH, Sabo RT, Neale MC. Toor AA, et al. Among authors: koparde v. Front Immunol. 2014 Dec 3;5:613. doi: 10.3389/fimmu.2014.00613. eCollection 2014. Front Immunol. 2014. PMID: 25520720 Free PMC article. Review.
Dynamical system modeling to simulate donor T cell response to whole exome sequencing-derived recipient peptides: Understanding randomness in alloreactivity incidence following stem cell transplantation.
Koparde V, Abdul Razzaq B, Suntum T, Sabo R, Scalora A, Serrano M, Jameson-Lee M, Hall C, Kobulnicky D, Sheth N, Feltz J, Contaifer D Jr, Wijesinghe D, Reed J, Roberts C, Qayyum R, Buck G, Neale M, Toor A. Koparde V, et al. PLoS One. 2017 Dec 1;12(12):e0187771. doi: 10.1371/journal.pone.0187771. eCollection 2017. PLoS One. 2017. PMID: 29194460 Free PMC article.
Dynamical System Modeling to Simulate Donor T Cell Response to Whole Exome Sequencing-Derived Recipient Peptides Demonstrates Different Alloreactivity Potential in HLA-Matched and -Mismatched Donor-Recipient Pairs.
Abdul Razzaq B, Scalora A, Koparde VN, Meier J, Mahmood M, Salman S, Jameson-Lee M, Serrano MG, Sheth N, Voelkner M, Kobulnicky DJ, Roberts CH, Ferreira-Gonzalez A, Manjili MH, Buck GA, Neale MC, Toor AA. Abdul Razzaq B, et al. Biol Blood Marrow Transplant. 2016 May;22(5):850-61. doi: 10.1016/j.bbmt.2015.11.1103. Epub 2015 Dec 11. Biol Blood Marrow Transplant. 2016. PMID: 26688192 Free PMC article.
BOTUX: bayesian-like operational taxonomic unit examiner.
Koparde VN, Adkins RS, Fettweis JM, Serrano MG, Buck GA, Reimers MA, Sheth NU. Koparde VN, et al. Int J Comput Biol Drug Des. 2014;7(2-3):130-45. doi: 10.1504/IJCBDD.2014.061652. Epub 2014 May 28. Int J Comput Biol Drug Des. 2014. PMID: 24878725 Free PMC article.
Comparison of Lactobacillus crispatus isolates from Lactobacillus-dominated vaginal microbiomes with isolates from microbiomes containing bacterial vaginosis-associated bacteria.
Abdelmaksoud AA, Koparde VN, Sheth NU, Serrano MG, Glascock AL, Fettweis JM, Strauss JF, Buck GA, Jefferson KK. Abdelmaksoud AA, et al. Microbiology (Reading). 2016 Mar;162(3):466-475. doi: 10.1099/mic.0.000238. Epub 2016 Jan 8. Microbiology (Reading). 2016. PMID: 26747455 Free PMC article.
44 results