Krainer AR - Search Results

1

Features of 5'-splice-site efficiency derived from disease-causing mutations and comparative genomics.

Roca X, Olson AJ, Rao AR, Enerly E, Kristensen VN, Børresen-Dale AL, Andresen BS, Krainer AR, Sachidanandam R. Roca X, et al. Among authors: krainer ar. Genome Res. 2008 Jan;18(1):77-87. doi: 10.1101/gr.6859308. Epub 2007 Nov 21. Genome Res. 2008. PMID: 18032726 Free PMC article.

2

Intrinsic differences between authentic and cryptic 5' splice sites.

Roca X, Sachidanandam R, Krainer AR. Roca X, et al. Among authors: krainer ar. Nucleic Acids Res. 2003 Nov 1;31(21):6321-33. doi: 10.1093/nar/gkg830. Nucleic Acids Res. 2003. PMID: 14576320 Free PMC article.

3

An LKB1 AT-AC intron mutation causes Peutz-Jeghers syndrome via splicing at noncanonical cryptic splice sites.

Hastings ML, Resta N, Traum D, Stella A, Guanti G, Krainer AR. Hastings ML, et al. Among authors: krainer ar. Nat Struct Mol Biol. 2005 Jan;12(1):54-9. doi: 10.1038/nsmb873. Epub 2004 Dec 19. Nat Struct Mol Biol. 2005. PMID: 15608654

4

Determinants of the inherent strength of human 5' splice sites.

Roca X, Sachidanandam R, Krainer AR. Roca X, et al. Among authors: krainer ar. RNA. 2005 May;11(5):683-98. doi: 10.1261/rna.2040605. RNA. 2005. PMID: 15840817 Free PMC article.

5

Short/branched-chain acyl-CoA dehydrogenase deficiency due to an IVS3+3A>G mutation that causes exon skipping.

Madsen PP, Kibaek M, Roca X, Sachidanandam R, Krainer AR, Christensen E, Steiner RD, Gibson KM, Corydon TJ, Knudsen I, Wanders RJ, Ruiter JP, Gregersen N, Andresen BS. Madsen PP, et al. Among authors: krainer ar. Hum Genet. 2006 Feb;118(6):680-90. doi: 10.1007/s00439-005-0070-4. Epub 2005 Nov 30. Hum Genet. 2006. PMID: 16317551

6

Comprehensive splice-site analysis using comparative genomics.

Sheth N, Roca X, Hastings ML, Roeder T, Krainer AR, Sachidanandam R. Sheth N, et al. Among authors: krainer ar. Nucleic Acids Res. 2006;34(14):3955-67. doi: 10.1093/nar/gkl556. Epub 2006 Aug 12. Nucleic Acids Res. 2006. PMID: 16914448 Free PMC article.

7

Antisense oligonucleotide-induced alternative splicing of the APOB mRNA generates a novel isoform of APOB.

Khoo B, Roca X, Chew SL, Krainer AR. Khoo B, et al. Among authors: krainer ar. BMC Mol Biol. 2007 Jan 17;8:3. doi: 10.1186/1471-2199-8-3. BMC Mol Biol. 2007. PMID: 17233885 Free PMC article.

8

Seemingly neutral polymorphic variants may confer immunity to splicing-inactivating mutations: a synonymous SNP in exon 5 of MCAD protects from deleterious mutations in a flanking exonic splicing enhancer.

Nielsen KB, Sørensen S, Cartegni L, Corydon TJ, Doktor TK, Schroeder LD, Reinert LS, Elpeleg O, Krainer AR, Gregersen N, Kjems J, Andresen BS. Nielsen KB, et al. Among authors: krainer ar. Am J Hum Genet. 2007 Mar;80(3):416-32. doi: 10.1086/511992. Epub 2007 Jan 18. Am J Hum Genet. 2007. PMID: 17273963 Free PMC article.

9

Extensive in silico analysis of NF1 splicing defects uncovers determinants for splicing outcome upon 5' splice-site disruption.

Wimmer K, Roca X, Beiglböck H, Callens T, Etzler J, Rao AR, Krainer AR, Fonatsch C, Messiaen L. Wimmer K, et al. Among authors: krainer ar. Hum Mutat. 2007 Jun;28(6):599-612. doi: 10.1002/humu.20493. Hum Mutat. 2007. PMID: 17311297

10

Dual-specificity splice sites function alternatively as 5' and 3' splice sites.

Zhang C, Hastings ML, Krainer AR, Zhang MQ. Zhang C, et al. Among authors: krainer ar. Proc Natl Acad Sci U S A. 2007 Sep 18;104(38):15028-33. doi: 10.1073/pnas.0703773104. Epub 2007 Sep 11. Proc Natl Acad Sci U S A. 2007. PMID: 17848517 Free PMC article.

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