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Rapid evolution of protein diversity by de novo origination in Oryza.
Zhang L, Ren Y, Yang T, Li G, Chen J, Gschwend AR, Yu Y, Hou G, Zi J, Zhou R, Wen B, Zhang J, Chougule K, Wang M, Copetti D, Peng Z, Zhang C, Zhang Y, Ouyang Y, Wing RA, Liu S, Long M. Zhang L, et al. Among authors: liu s. Nat Ecol Evol. 2019 Apr;3(4):679-690. doi: 10.1038/s41559-019-0822-5. Epub 2019 Mar 11. Nat Ecol Evol. 2019. PMID: 30858588
A draft sequence of the rice genome (Oryza sativa L. ssp. indica).
Yu J, Hu S, Wang J, Wong GK, Li S, Liu B, Deng Y, Dai L, Zhou Y, Zhang X, Cao M, Liu J, Sun J, Tang J, Chen Y, Huang X, Lin W, Ye C, Tong W, Cong L, Geng J, Han Y, Li L, Li W, Hu G, Huang X, Li W, Li J, Liu Z, Li L, Liu J, Qi Q, Liu J, Li L, Li T, Wang X, Lu H, Wu T, Zhu M, Ni P, Han H, Dong W, Ren X, Feng X, Cui P, Li X, Wang H, Xu X, Zhai W, Xu Z, Zhang J, He S, Zhang J, Xu J, Zhang K, Zheng X, Dong J, Zeng W, Tao L, Ye J, Tan J, Ren X, Chen X, He J, Liu D, Tian W, Tian C, Xia H, Bao Q, Li G, Gao H, Cao T, Wang J, Zhao W, Li P, Chen W, Wang X, Zhang Y, Hu J, Wang J, Liu S, Yang J, Zhang G, Xiong Y, Li Z, Mao L, Zhou C, Zhu Z, Chen R, Hao B, Zheng W, Chen S, Guo W, Li G, Liu S, Tao M, Wang J, Zhu L, Yuan L, Yang H. Yu J, et al. Among authors: liu j, liu z, liu s, liu b, liu d. Science. 2002 Apr 5;296(5565):79-92. doi: 10.1126/science.1068037. Science. 2002. PMID: 11935017
A strategy for searching antigenic regions in the SARS-CoV spike protein.
Ren Y, Zhou Z, Liu J, Lin L, Li S, Wang H, Xia J, Zhao Z, Wen J, Zhou C, Wang J, Yin J, Xu N, Liu S. Ren Y, et al. Among authors: liu j, liu s. Genomics Proteomics Bioinformatics. 2003 Aug;1(3):207-15. doi: 10.1016/s1672-0229(03)01026-x. Genomics Proteomics Bioinformatics. 2003. PMID: 15629033 Free PMC article.
The Genomes of Oryza sativa: a history of duplications.
Yu J, Wang J, Lin W, Li S, Li H, Zhou J, Ni P, Dong W, Hu S, Zeng C, Zhang J, Zhang Y, Li R, Xu Z, Li S, Li X, Zheng H, Cong L, Lin L, Yin J, Geng J, Li G, Shi J, Liu J, Lv H, Li J, Wang J, Deng Y, Ran L, Shi X, Wang X, Wu Q, Li C, Ren X, Wang J, Wang X, Li D, Liu D, Zhang X, Ji Z, Zhao W, Sun Y, Zhang Z, Bao J, Han Y, Dong L, Ji J, Chen P, Wu S, Liu J, Xiao Y, Bu D, Tan J, Yang L, Ye C, Zhang J, Xu J, Zhou Y, Yu Y, Zhang B, Zhuang S, Wei H, Liu B, Lei M, Yu H, Li Y, Xu H, Wei S, He X, Fang L, Zhang Z, Zhang Y, Huang X, Su Z, Tong W, Li J, Tong Z, Li S, Ye J, Wang L, Fang L, Lei T, Chen C, Chen H, Xu Z, Li H, Huang H, Zhang F, Xu H, Li N, Zhao C, Li S, Dong L, Huang Y, Li L, Xi Y, Qi Q, Li W, Zhang B, Hu W, Zhang Y, Tian X, Jiao Y, Liang X, Jin J, Gao L, Zheng W, Hao B, Liu S, Wang W, Yuan L, Cao M, McDermott J, Samudrala R, Wang J, Wong GK, Yang H. Yu J, et al. Among authors: liu j, liu s, liu b, liu d. PLoS Biol. 2005 Feb;3(2):e38. doi: 10.1371/journal.pbio.0030038. Epub 2005 Feb 1. PLoS Biol. 2005. PMID: 15685292 Free PMC article.
[Phosphoproteomic investigation of Clostridium acetobutylicum].
Bai X, Zhao J, Wang Q, Tong W, Zhang J, Zi J, Chen Z, Liu S, Wang Q. Bai X, et al. Among authors: liu s. Sheng Wu Gong Cheng Xue Bao. 2010 Oct;26(10):1357-62. Sheng Wu Gong Cheng Xue Bao. 2010. PMID: 21218622 Chinese.
Evolutionary transients in the rice transcriptome.
Wang J, Zhang J, Li R, Zheng H, Li J, Zhang Y, Li H, Ni P, Li S, Li S, Wang J, Liu D, McDermott J, Samudrala R, Liu S, Wang J, Yang H, Yu J, Wong GK. Wang J, et al. Among authors: liu s, liu d. Genomics Proteomics Bioinformatics. 2010 Dec;8(4):211-28. doi: 10.1016/S1672-0229(10)60023-X. Genomics Proteomics Bioinformatics. 2010. PMID: 21382590 Free PMC article.
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