MacAlpine DM - Search Results

1

Drosophila ORC localizes to open chromatin and marks sites of cohesin complex loading.

MacAlpine HK, Gordân R, Powell SK, Hartemink AJ, MacAlpine DM. MacAlpine HK, et al. Among authors: macalpine dm. Genome Res. 2010 Feb;20(2):201-11. doi: 10.1101/gr.097873.109. Epub 2009 Dec 7. Genome Res. 2010. PMID: 19996087 Free PMC article.

2

Chromatin signatures of the Drosophila replication program.

Eaton ML, Prinz JA, MacAlpine HK, Tretyakov G, Kharchenko PV, MacAlpine DM. Eaton ML, et al. Among authors: macalpine hk, macalpine dm. Genome Res. 2011 Feb;21(2):164-74. doi: 10.1101/gr.116038.110. Epub 2010 Dec 22. Genome Res. 2011. PMID: 21177973 Free PMC article.

3

Genome-wide localization of replication factors.

Lubelsky Y, MacAlpine HK, MacAlpine DM. Lubelsky Y, et al. Among authors: macalpine hk, macalpine dm. Methods. 2012 Jun;57(2):187-95. doi: 10.1016/j.ymeth.2012.03.022. Epub 2012 Mar 24. Methods. 2012. PMID: 22465279

4

Heterogeneous polymerase fidelity and mismatch repair bias genome variation and composition.

Lujan SA, Clausen AR, Clark AB, MacAlpine HK, MacAlpine DM, Malc EP, Mieczkowski PA, Burkholder AB, Fargo DC, Gordenin DA, Kunkel TA. Lujan SA, et al. Among authors: macalpine hk, macalpine dm. Genome Res. 2014 Nov;24(11):1751-64. doi: 10.1101/gr.178335.114. Epub 2014 Sep 12. Genome Res. 2014. PMID: 25217194 Free PMC article.

5

Dynamic loading and redistribution of the Mcm2-7 helicase complex through the cell cycle.

Powell SK, MacAlpine HK, Prinz JA, Li Y, Belsky JA, MacAlpine DM. Powell SK, et al. Among authors: macalpine hk, macalpine dm. EMBO J. 2015 Feb 12;34(4):531-43. doi: 10.15252/embj.201488307. Epub 2015 Jan 2. EMBO J. 2015. PMID: 25555795 Free PMC article.

6

Genome-wide chromatin footprinting reveals changes in replication origin architecture induced by pre-RC assembly.

Belsky JA, MacAlpine HK, Lubelsky Y, Hartemink AJ, MacAlpine DM. Belsky JA, et al. Among authors: macalpine hk, macalpine dm. Genes Dev. 2015 Jan 15;29(2):212-24. doi: 10.1101/gad.247924.114. Genes Dev. 2015. PMID: 25593310 Free PMC article.

7

Disruption of origin chromatin structure by helicase activation in the absence of DNA replication.

Hoffman RA, MacAlpine HK, MacAlpine DM. Hoffman RA, et al. Among authors: macalpine dm. Genes Dev. 2021 Oct 1;35(19-20):1339-1355. doi: 10.1101/gad.348517.121. Epub 2021 Sep 23. Genes Dev. 2021. PMID: 34556529 Free PMC article.

8

Nascent chromatin occupancy profiling reveals locus- and factor-specific chromatin maturation dynamics behind the DNA replication fork.

Gutiérrez MP, MacAlpine HK, MacAlpine DM. Gutiérrez MP, et al. Among authors: macalpine hk, macalpine dm. Genome Res. 2019 Jul;29(7):1123-1133. doi: 10.1101/gr.243386.118. Epub 2019 Jun 19. Genome Res. 2019. PMID: 31217252 Free PMC article.

9

Local nucleosome dynamics and eviction following a double-strand break are reversible by NHEJ-mediated repair in the absence of DNA replication.

Tripuraneni V, Memisoglu G, MacAlpine HK, Tran TQ, Zhu W, Hartemink AJ, Haber JE, MacAlpine DM. Tripuraneni V, et al. Among authors: macalpine dm. Genome Res. 2021 May;31(5):775-788. doi: 10.1101/gr.271155.120. Epub 2021 Apr 2. Genome Res. 2021. PMID: 33811083 Free PMC article.

10

Linking the dynamics of chromatin occupancy and transcription with predictive models.

Tran TQ, MacAlpine HK, Tripuraneni V, Mitra S, MacAlpine DM, Hartemink AJ. Tran TQ, et al. Among authors: macalpine dm. Genome Res. 2021 Jun;31(6):1035-1046. doi: 10.1101/gr.267237.120. Epub 2021 Apr 23. Genome Res. 2021. PMID: 33893157 Free PMC article.

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