Marchal K - Search Results

1

Unveiling combinatorial regulation through the combination of ChIP information and in silico cis-regulatory module detection.

Sun H, Guns T, Fierro AC, Thorrez L, Nijssen S, Marchal K. Sun H, et al. Among authors: marchal k. Nucleic Acids Res. 2012 Jul;40(12):e90. doi: 10.1093/nar/gks237. Epub 2012 Mar 15. Nucleic Acids Res. 2012. PMID: 22422841 Free PMC article.

2

PlantCARE, a database of plant cis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences.

Lescot M, Déhais P, Thijs G, Marchal K, Moreau Y, Van de Peer Y, Rouzé P, Rombauts S. Lescot M, et al. Among authors: marchal k. Nucleic Acids Res. 2002 Jan 1;30(1):325-7. doi: 10.1093/nar/30.1.325. Nucleic Acids Res. 2002. PMID: 11752327 Free PMC article.

3

INCLUSive: A web portal and service registry for microarray and regulatory sequence analysis.

Coessens B, Thijs G, Aerts S, Marchal K, De Smet F, Engelen K, Glenisson P, Moreau Y, Mathys J, De Moor B. Coessens B, et al. Among authors: marchal k. Nucleic Acids Res. 2003 Jul 1;31(13):3468-70. doi: 10.1093/nar/gkg615. Nucleic Acids Res. 2003. PMID: 12824346 Free PMC article.

4

Using ribosomal protein genes as reference: a tale of caution.

Thorrez L, Van Deun K, Tranchevent LC, Van Lommel L, Engelen K, Marchal K, Moreau Y, Van Mechelen I, Schuit F. Thorrez L, et al. Among authors: marchal k. PLoS One. 2008 Mar 26;3(3):e1854. doi: 10.1371/journal.pone.0001854. PLoS One. 2008. PMID: 18365009 Free PMC article.

5

ModuleDigger: an itemset mining framework for the detection of cis-regulatory modules.

Sun H, De Bie T, Storms V, Fu Q, Dhollander T, Lemmens K, Verstuyf A, De Moor B, Marchal K. Sun H, et al. Among authors: marchal k. BMC Bioinformatics. 2009 Jan 30;10 Suppl 1(Suppl 1):S30. doi: 10.1186/1471-2105-10-S1-S30. BMC Bioinformatics. 2009. PMID: 19208131 Free PMC article.

6

Meta Analysis of Gene Expression Data within and Across Species.

Fierro AC, Vandenbussche F, Engelen K, Van de Peer Y, Marchal K. Fierro AC, et al. Among authors: marchal k. Curr Genomics. 2008 Dec;9(8):525-34. doi: 10.2174/138920208786847935. Curr Genomics. 2008. PMID: 19516959 Free PMC article.

7

ViTraM: visualization of transcriptional modules.

Sun H, Lemmens K, Van den Bulcke T, Engelen K, De Moor B, Marchal K. Sun H, et al. Among authors: marchal k. Bioinformatics. 2009 Sep 15;25(18):2450-1. doi: 10.1093/bioinformatics/btp400. Epub 2009 Jul 8. Bioinformatics. 2009. PMID: 19587224

8

Inferring the transcriptional network of Bacillus subtilis.

Fadda A, Fierro AC, Lemmens K, Monsieurs P, Engelen K, Marchal K. Fadda A, et al. Among authors: marchal k. Mol Biosyst. 2009 Dec;5(12):1840-52. doi: 10.1039/b907310h. Epub 2009 Jul 28. Mol Biosyst. 2009. PMID: 20023724

9

Use of structural DNA properties for the prediction of transcription-factor binding sites in Escherichia coli.

Meysman P, Dang TH, Laukens K, De Smet R, Wu Y, Marchal K, Engelen K. Meysman P, et al. Among authors: marchal k. Nucleic Acids Res. 2011 Jan;39(2):e6. doi: 10.1093/nar/gkq1071. Epub 2010 Nov 4. Nucleic Acids Res. 2011. PMID: 21051340 Free PMC article.

10

COMODO: an adaptive coclustering strategy to identify conserved coexpression modules between organisms.

Zarrineh P, Fierro AC, Sánchez-Rodríguez A, De Moor B, Engelen K, Marchal K. Zarrineh P, et al. Among authors: marchal k. Nucleic Acids Res. 2011 Apr;39(7):e41. doi: 10.1093/nar/gkq1275. Epub 2010 Dec 10. Nucleic Acids Res. 2011. PMID: 21149270 Free PMC article.

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