Narasimhan G - Search Results

1

GPUDePiCt: A Parallel Implementation of a Clustering Algorithm for Computing Degenerate Primers on Graphics Processing Units.

Cickovski T, Flor T, Irving-Sachs G, Novikov P, Parda J, Narasimhan G. Cickovski T, et al. Among authors: narasimhan g. IEEE/ACM Trans Comput Biol Bioinform. 2015 Mar-Apr;12(2):445-54. doi: 10.1109/TCBB.2014.2355231. IEEE/ACM Trans Comput Biol Bioinform. 2015. PMID: 26357230

2

Multiomic analysis reveals microbiome-related relationships between cocaine use and metabolites.

Martinez SS, Stebliankin V, Hernandez J, Martin H, Tamargo J, Rodriguez JB, Teeman C, Johnson A, Seminario L, Campa A, Narasimhan G, Baum MK. Martinez SS, et al. Among authors: narasimhan g. AIDS. 2022 Dec 1;36(15):2089-2099. doi: 10.1097/QAD.0000000000003363. Epub 2022 Aug 18. AIDS. 2022. PMID: 36382433 Free PMC article.

3

Degenerate primer design via clustering.

Wei X, Kuhn DN, Narasimhan G. Wei X, et al. Among authors: narasimhan g. Proc IEEE Comput Soc Bioinform Conf. 2003;2:75-83. Proc IEEE Comput Soc Bioinform Conf. 2003. PMID: 16452781

4

Metagenomics, Metatranscriptomics, and Metabolomics Approaches for Microbiome Analysis.

Aguiar-Pulido V, Huang W, Suarez-Ulloa V, Cickovski T, Mathee K, Narasimhan G. Aguiar-Pulido V, et al. Among authors: narasimhan g. Evol Bioinform Online. 2016 May 12;12(Suppl 1):5-16. doi: 10.4137/EBO.S36436. eCollection 2016. Evol Bioinform Online. 2016. PMID: 27199545 Free PMC article. Review.

5

ATria: a novel centrality algorithm applied to biological networks.

Cickovski T, Peake E, Aguiar-Pulido V, Narasimhan G. Cickovski T, et al. Among authors: narasimhan g. BMC Bioinformatics. 2017 Jun 7;18(Suppl 8):239. doi: 10.1186/s12859-017-1659-z. BMC Bioinformatics. 2017. PMID: 28617231 Free PMC article.

6

Constructing lightweight and flexible pipelines using Plugin-Based Microbiome Analysis (PluMA).

Cickovski T, Narasimhan G. Cickovski T, et al. Among authors: narasimhan g. Bioinformatics. 2018 Sep 1;34(17):2881-2888. doi: 10.1093/bioinformatics/bty198. Bioinformatics. 2018. PMID: 29618009 Free PMC article.

7

MATria: a unified centrality algorithm.

Cickovski T, Aguiar-Pulido V, Narasimhan G. Cickovski T, et al. Among authors: narasimhan g. BMC Bioinformatics. 2019 Jun 6;20(Suppl 11):278. doi: 10.1186/s12859-019-2820-7. BMC Bioinformatics. 2019. PMID: 31167635 Free PMC article.

8

Microbiome depiction through user-adapted bioinformatic pipelines and parameters.

Nayman EI, Schwartz BA, Polanco FC, Firek AK, Gumabong AC, Hofstee NJ, Narasimhan G, Cickovski T, Mathee K. Nayman EI, et al. Among authors: narasimhan g. J Med Microbiol. 2023 Oct;72(10). doi: 10.1099/jmm.0.001756. J Med Microbiol. 2023. PMID: 37823280

9

Guest Editors' introduction to the special section on bioinformatics research and applications.

Mandoiu I, Narasimhan G, Pan Y, Zhang Y. Mandoiu I, et al. Among authors: narasimhan g. IEEE/ACM Trans Comput Biol Bioinform. 2010 Oct-Dec;7(4):577-8. doi: 10.1109/tcbb.2010.114. IEEE/ACM Trans Comput Biol Bioinform. 2010. PMID: 21058452 No abstract available.

10

The gut microbiome and neuropsychiatric disorders: implications for attention deficit hyperactivity disorder (ADHD).

Mathee K, Cickovski T, Deoraj A, Stollstorff M, Narasimhan G. Mathee K, et al. Among authors: narasimhan g. J Med Microbiol. 2020 Jan;69(1):14-24. doi: 10.1099/jmm.0.001112. J Med Microbiol. 2020. PMID: 31821133 Free PMC article. Review.

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