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Repeated observation of breast tumor subtypes in independent gene expression data sets.
Sorlie T, Tibshirani R, Parker J, Hastie T, Marron JS, Nobel A, Deng S, Johnsen H, Pesich R, Geisler S, Demeter J, Perou CM, Lønning PE, Brown PO, Børresen-Dale AL, Botstein D. Sorlie T, et al. Among authors: parker j. Proc Natl Acad Sci U S A. 2003 Jul 8;100(14):8418-23. doi: 10.1073/pnas.0932692100. Epub 2003 Jun 26. Proc Natl Acad Sci U S A. 2003. PMID: 12829800 Free PMC article.
Adjustment of systematic microarray data biases.
Benito M, Parker J, Du Q, Wu J, Xiang D, Perou CM, Marron JS. Benito M, et al. Among authors: parker j. Bioinformatics. 2004 Jan 1;20(1):105-14. doi: 10.1093/bioinformatics/btg385. Bioinformatics. 2004. PMID: 14693816
Classification and risk stratification of invasive breast carcinomas using a real-time quantitative RT-PCR assay.
Perreard L, Fan C, Quackenbush JF, Mullins M, Gauthier NP, Nelson E, Mone M, Hansen H, Buys SS, Rasmussen K, Orrico AR, Dreher D, Walters R, Parker J, Hu Z, He X, Palazzo JP, Olopade OI, Szabo A, Perou CM, Bernard PS. Perreard L, et al. Breast Cancer Res. 2006;8(2):R23. doi: 10.1186/bcr1399. Epub 2006 Apr 20. Breast Cancer Res. 2006. PMID: 16626501 Free PMC article.
The molecular portraits of breast tumors are conserved across microarray platforms.
Hu Z, Fan C, Oh DS, Marron JS, He X, Qaqish BF, Livasy C, Carey LA, Reynolds E, Dressler L, Nobel A, Parker J, Ewend MG, Sawyer LR, Wu J, Liu Y, Nanda R, Tretiakova M, Ruiz Orrico A, Dreher D, Palazzo JP, Perreard L, Nelson E, Mone M, Hansen H, Mullins M, Quackenbush JF, Ellis MJ, Olopade OI, Bernard PS, Perou CM. Hu Z, et al. Among authors: parker j. BMC Genomics. 2006 Apr 27;7:96. doi: 10.1186/1471-2164-7-96. BMC Genomics. 2006. PMID: 16643655 Free PMC article.
Microarray analysis of miRNA gene expression.
Thomson JM, Parker JS, Hammond SM. Thomson JM, et al. Among authors: parker js. Methods Enzymol. 2007;427:107-22. doi: 10.1016/S0076-6879(07)27006-5. Methods Enzymol. 2007. PMID: 17720481
565 results