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A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology.
Herrgård MJ, Swainston N, Dobson P, Dunn WB, Arga KY, Arvas M, Blüthgen N, Borger S, Costenoble R, Heinemann M, Hucka M, Le Novère N, Li P, Liebermeister W, Mo ML, Oliveira AP, Petranovic D, Pettifer S, Simeonidis E, Smallbone K, Spasić I, Weichart D, Brent R, Broomhead DS, Westerhoff HV, Kirdar B, Penttilä M, Klipp E, Palsson BØ, Sauer U, Oliver SG, Mendes P, Nielsen J, Kell DB. Herrgård MJ, et al. Among authors: pettifer s. Nat Biotechnol. 2008 Oct;26(10):1155-60. doi: 10.1038/nbt1492. Nat Biotechnol. 2008. PMID: 18846089 Free PMC article.
Arcadia: a visualization tool for metabolic pathways.
Villéger AC, Pettifer SR, Kell DB. Villéger AC, et al. Bioinformatics. 2010 Jun 1;26(11):1470-1. doi: 10.1093/bioinformatics/btq154. Epub 2010 May 7. Bioinformatics. 2010. PMID: 20453003 Free PMC article.
Utopia documents: linking scholarly literature with research data.
Attwood TK, Kell DB, McDermott P, Marsh J, Pettifer SR, Thorne D. Attwood TK, et al. Among authors: pettifer sr. Bioinformatics. 2010 Sep 15;26(18):i568-74. doi: 10.1093/bioinformatics/btq383. Bioinformatics. 2010. PMID: 20823323 Free PMC article.
An active registry for bioinformatics web services.
Pettifer S, Thorne D, McDermott P, Attwood T, Baran J, Bryne JC, Hupponen T, Mowbray D, Vriend G. Pettifer S, et al. Bioinformatics. 2009 Aug 15;25(16):2090-1. doi: 10.1093/bioinformatics/btp329. Epub 2009 May 21. Bioinformatics. 2009. PMID: 19460889 Free PMC article.
The EMBRACE web service collection.
Pettifer S, Ison J, Kalas M, Thorne D, McDermott P, Jonassen I, Liaquat A, Fernández JM, Rodriguez JM; INB-Partners; Pisano DG, Blanchet C, Uludag M, Rice P, Bartaseviciute E, Rapacki K, Hekkelman M, Sand O, Stockinger H, Clegg AB, Bongcam-Rudloff E, Salzemann J, Breton V, Attwood TK, Cameron G, Vriend G. Pettifer S, et al. Nucleic Acids Res. 2010 Jul;38(Web Server issue):W683-8. doi: 10.1093/nar/gkq297. Epub 2010 May 12. Nucleic Acids Res. 2010. PMID: 20462862 Free PMC article.
31 results