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BioXSD: the common data-exchange format for everyday bioinformatics web services.
Kalas M, Puntervoll P, Joseph A, Bartaseviciūte E, Töpfer A, Venkataraman P, Pettifer S, Bryne JC, Ison J, Blanchet C, Rapacki K, Jonassen I. Kalas M, et al. Among authors: pettifer s. Bioinformatics. 2010 Sep 15;26(18):i540-6. doi: 10.1093/bioinformatics/btq391. Bioinformatics. 2010. PMID: 20823319 Free PMC article.
An active registry for bioinformatics web services.
Pettifer S, Thorne D, McDermott P, Attwood T, Baran J, Bryne JC, Hupponen T, Mowbray D, Vriend G. Pettifer S, et al. Bioinformatics. 2009 Aug 15;25(16):2090-1. doi: 10.1093/bioinformatics/btp329. Epub 2009 May 21. Bioinformatics. 2009. PMID: 19460889 Free PMC article.
The EMBRACE web service collection.
Pettifer S, Ison J, Kalas M, Thorne D, McDermott P, Jonassen I, Liaquat A, Fernández JM, Rodriguez JM; INB-Partners; Pisano DG, Blanchet C, Uludag M, Rice P, Bartaseviciute E, Rapacki K, Hekkelman M, Sand O, Stockinger H, Clegg AB, Bongcam-Rudloff E, Salzemann J, Breton V, Attwood TK, Cameron G, Vriend G. Pettifer S, et al. Nucleic Acids Res. 2010 Jul;38(Web Server issue):W683-8. doi: 10.1093/nar/gkq297. Epub 2010 May 12. Nucleic Acids Res. 2010. PMID: 20462862 Free PMC article.
Experience using web services for biological sequence analysis.
Stockinger H, Attwood T, Chohan SN, Côté R, Cudré-Mauroux P, Falquet L, Fernandes P, Finn RD, Hupponen T, Korpelainen E, Labarga A, Laugraud A, Lima T, Pafilis E, Pagni M, Pettifer S, Phan I, Rahman N. Stockinger H, et al. Among authors: pettifer s. Brief Bioinform. 2008 Nov;9(6):493-505. doi: 10.1093/bib/bbn029. Epub 2008 Jul 11. Brief Bioinform. 2008. PMID: 18621748 Free PMC article.
WIWS: a protein structure bioinformatics Web service collection.
Hekkelman ML, Te Beek TA, Pettifer SR, Thorne D, Attwood TK, Vriend G. Hekkelman ML, et al. Among authors: pettifer sr. Nucleic Acids Res. 2010 Jul;38(Web Server issue):W719-23. doi: 10.1093/nar/gkq453. Epub 2010 May 25. Nucleic Acids Res. 2010. PMID: 20501602 Free PMC article.
BioCatalogue: a universal catalogue of web services for the life sciences.
Bhagat J, Tanoh F, Nzuobontane E, Laurent T, Orlowski J, Roos M, Wolstencroft K, Aleksejevs S, Stevens R, Pettifer S, Lopez R, Goble CA. Bhagat J, et al. Among authors: pettifer s. Nucleic Acids Res. 2010 Jul;38(Web Server issue):W689-94. doi: 10.1093/nar/gkq394. Epub 2010 May 19. Nucleic Acids Res. 2010. PMID: 20484378 Free PMC article.
Arcadia: a visualization tool for metabolic pathways.
Villéger AC, Pettifer SR, Kell DB. Villéger AC, et al. Bioinformatics. 2010 Jun 1;26(11):1470-1. doi: 10.1093/bioinformatics/btq154. Epub 2010 May 7. Bioinformatics. 2010. PMID: 20453003 Free PMC article.
Utopia documents: linking scholarly literature with research data.
Attwood TK, Kell DB, McDermott P, Marsh J, Pettifer SR, Thorne D. Attwood TK, et al. Among authors: pettifer sr. Bioinformatics. 2010 Sep 15;26(18):i568-74. doi: 10.1093/bioinformatics/btq383. Bioinformatics. 2010. PMID: 20823323 Free PMC article.
31 results