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The DBCLS BioHackathon: standardization and interoperability for bioinformatics web services and workflows. The DBCLS BioHackathon Consortium*.
Katayama T, Arakawa K, Nakao M, Ono K, Aoki-Kinoshita KF, Yamamoto Y, Yamaguchi A, Kawashima S, Chun HW, Aerts J, Aranda B, Barboza LH, Bonnal RJ, Bruskiewich R, Bryne JC, Fernández JM, Funahashi A, Gordon PM, Goto N, Groscurth A, Gutteridge A, Holland R, Kano Y, Kawas EA, Kerhornou A, Kibukawa E, Kinjo AR, Kuhn M, Lapp H, Lehvaslaiho H, Nakamura H, Nakamura Y, Nishizawa T, Nobata C, Noguchi T, Oinn TM, Okamoto S, Owen S, Pafilis E, Pocock M, Prins P, Ranzinger R, Reisinger F, Salwinski L, Schreiber M, Senger M, Shigemoto Y, Standley DM, Sugawara H, Tashiro T, Trelles O, Vos RA, Wilkinson MD, York W, Zmasek CM, Asai K, Takagi T. Katayama T, et al. Among authors: pocock m. J Biomed Semantics. 2010 Aug 21;1(1):8. doi: 10.1186/2041-1480-1-8. J Biomed Semantics. 2010. PMID: 20727200 Free PMC article.
The Bioperl toolkit: Perl modules for the life sciences.
Stajich JE, Block D, Boulez K, Brenner SE, Chervitz SA, Dagdigian C, Fuellen G, Gilbert JG, Korf I, Lapp H, Lehväslaiho H, Matsalla C, Mungall CJ, Osborne BI, Pocock MR, Schattner P, Senger M, Stein LD, Stupka E, Wilkinson MD, Birney E. Stajich JE, et al. Among authors: pocock mr. Genome Res. 2002 Oct;12(10):1611-8. doi: 10.1101/gr.361602. Genome Res. 2002. PMID: 12368254 Free PMC article.
Taverna: a tool for the composition and enactment of bioinformatics workflows.
Oinn T, Addis M, Ferris J, Marvin D, Senger M, Greenwood M, Carver T, Glover K, Pocock MR, Wipat A, Li P. Oinn T, et al. Among authors: pocock mr. Bioinformatics. 2004 Nov 22;20(17):3045-54. doi: 10.1093/bioinformatics/bth361. Epub 2004 Jun 16. Bioinformatics. 2004. PMID: 15201187
Saint: a lightweight integration environment for model annotation.
Lister AL, Pocock M, Taschuk M, Wipat A. Lister AL, et al. Among authors: pocock m. Bioinformatics. 2009 Nov 15;25(22):3026-7. doi: 10.1093/bioinformatics/btp523. Epub 2009 Sep 4. Bioinformatics. 2009. PMID: 19734151 Free PMC article.
Customizable views on semantically integrated networks for systems biology.
Weile J, Pocock M, Cockell SJ, Lord P, Dewar JM, Holstein EM, Wilkinson D, Lydall D, Hallinan J, Wipat A. Weile J, et al. Among authors: pocock m. Bioinformatics. 2011 May 1;27(9):1299-306. doi: 10.1093/bioinformatics/btr134. Epub 2011 Mar 16. Bioinformatics. 2011. PMID: 21414991 Free PMC article.
Ontology for genome comparison and genomic rearrangements.
Flanagan K, Stevens R, Pocock M, Lee P, Wipat A. Flanagan K, et al. Among authors: pocock m. Comp Funct Genomics. 2004;5(6-7):537-44. doi: 10.1002/cfg.436. Comp Funct Genomics. 2004. PMID: 18629137 Free PMC article.
An integrated dataset for in silico drug discovery.
Cockell SJ, Weile J, Lord P, Wipat C, Andriychenko D, Pocock M, Wilkinson D, Young M, Wipat A. Cockell SJ, et al. Among authors: pocock m. J Integr Bioinform. 2010 Mar 25;7(3). doi: 10.2390/biecoll-jib-2010-116. J Integr Bioinform. 2010. PMID: 20375448
95 results