Pollack J - Search Results

1

ESR1 gene amplification in breast cancer: a common phenomenon?

Horlings HM, Bergamaschi A, Nordgard SH, Kim YH, Han W, Noh DY, Salari K, Joosse SA, Reyal F, Lingjaerde OC, Kristensen VN, Børresen-Dale AL, Pollack J, van de Vijver MJ. Horlings HM, et al. Among authors: pollack j. Nat Genet. 2008 Jul;40(7):807-8; author reply 810-2. doi: 10.1038/ng0708-807. Nat Genet. 2008. PMID: 18583965 No abstract available.

2

CAMK1D amplification implicated in epithelial-mesenchymal transition in basal-like breast cancer.

Bergamaschi A, Kim YH, Kwei KA, La Choi Y, Bocanegra M, Langerød A, Han W, Noh DY, Huntsman DG, Jeffrey SS, Børresen-Dale AL, Pollack JR. Bergamaschi A, et al. Mol Oncol. 2008 Dec;2(4):327-39. doi: 10.1016/j.molonc.2008.09.004. Epub 2008 Oct 2. Mol Oncol. 2008. PMID: 19383354 Free PMC article.

3

Distinct patterns of DNA copy number alteration are associated with different clinicopathological features and gene-expression subtypes of breast cancer.

Bergamaschi A, Kim YH, Wang P, Sørlie T, Hernandez-Boussard T, Lonning PE, Tibshirani R, Børresen-Dale AL, Pollack JR. Bergamaschi A, et al. Genes Chromosomes Cancer. 2006 Nov;45(11):1033-40. doi: 10.1002/gcc.20366. Genes Chromosomes Cancer. 2006. PMID: 16897746

4

Focal amplification and oncogene dependency of GAB2 in breast cancer.

Bocanegra M, Bergamaschi A, Kim YH, Miller MA, Rajput AB, Kao J, Langerød A, Han W, Noh DY, Jeffrey SS, Huntsman DG, Børresen-Dale AL, Pollack JR. Bocanegra M, et al. Among authors: pollack jr. Oncogene. 2010 Feb 4;29(5):774-9. doi: 10.1038/onc.2009.364. Epub 2009 Nov 2. Oncogene. 2010. PMID: 19881546

5

Comparative genomic hybridization on spotted oligonucleotide microarrays.

Kim YH, Pollack JR. Kim YH, et al. Methods Mol Biol. 2009;556:21-32. doi: 10.1007/978-1-60327-192-9_3. Methods Mol Biol. 2009. PMID: 19488869 Free PMC article.

6

Regularized Multivariate Regression for Identifying Master Predictors with Application to Integrative Genomics Study of Breast Cancer.

Peng J, Zhu J, Bergamaschi A, Han W, Noh DY, Pollack JR, Wang P. Peng J, et al. Among authors: pollack jr. Ann Appl Stat. 2010 Mar;4(1):53-77. doi: 10.1214/09-AOAS271SUPP. Ann Appl Stat. 2010. PMID: 24489618 Free PMC article.

7

Integration of diverse microarray data types.

Salari K, Pollack JR. Salari K, et al. Methods Mol Biol. 2009;556:205-16. doi: 10.1007/978-1-60327-192-9_15. Methods Mol Biol. 2009. PMID: 19488881

8

Genomic profiling identifies GATA6 as a candidate oncogene amplified in pancreatobiliary cancer.

Kwei KA, Bashyam MD, Kao J, Ratheesh R, Reddy EC, Kim YH, Montgomery K, Giacomini CP, Choi YL, Chatterjee S, Karikari CA, Salari K, Wang P, Hernandez-Boussard T, Swarnalata G, van de Rijn M, Maitra A, Pollack JR. Kwei KA, et al. Among authors: pollack jr. PLoS Genet. 2008 May 23;4(5):e1000081. doi: 10.1371/journal.pgen.1000081. PLoS Genet. 2008. PMID: 18535672 Free PMC article.

9

DR-Integrator: a new analytic tool for integrating DNA copy number and gene expression data.

Salari K, Tibshirani R, Pollack JR. Salari K, et al. Bioinformatics. 2010 Feb 1;26(3):414-6. doi: 10.1093/bioinformatics/btp702. Epub 2009 Dec 22. Bioinformatics. 2010. PMID: 20031972 Free PMC article.

10

Genomic instability in breast cancer: pathogenesis and clinical implications.

Kwei KA, Kung Y, Salari K, Holcomb IN, Pollack JR. Kwei KA, et al. Mol Oncol. 2010 Jun;4(3):255-66. doi: 10.1016/j.molonc.2010.04.001. Epub 2010 Apr 9. Mol Oncol. 2010. PMID: 20434415 Free PMC article. Review.

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