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Using phylogenetically-informed annotation (PIA) to search for light-interacting genes in transcriptomes from non-model organisms.
Speiser DI, Pankey MS, Zaharoff AK, Battelle BA, Bracken-Grissom HD, Breinholt JW, Bybee SM, Cronin TW, Garm A, Lindgren AR, Patel NH, Porter ML, Protas ME, Rivera AS, Serb JM, Zigler KS, Crandall KA, Oakley TH. Speiser DI, et al. Among authors: porter ml. BMC Bioinformatics. 2014 Nov 19;15(1):350. doi: 10.1186/s12859-014-0350-x. BMC Bioinformatics. 2014. PMID: 25407802 Free PMC article.
New methods for inferring population dynamics from microbial sequences.
Pérez-Losada M, Porter ML, Tazi L, Crandall KA. Pérez-Losada M, et al. Among authors: porter ml. Infect Genet Evol. 2007 Jan;7(1):24-43. doi: 10.1016/j.meegid.2006.03.004. Epub 2006 Apr 19. Infect Genet Evol. 2007. PMID: 16627010 Free PMC article. Review.
Shedding new light on opsin evolution.
Porter ML, Blasic JR, Bok MJ, Cameron EG, Pringle T, Cronin TW, Robinson PR. Porter ML, et al. Proc Biol Sci. 2012 Jan 7;279(1726):3-14. doi: 10.1098/rspb.2011.1819. Epub 2011 Oct 19. Proc Biol Sci. 2012. PMID: 22012981 Free PMC article. Review.
Opsin Repertoire and Expression Patterns in Horseshoe Crabs: Evidence from the Genome of Limulus polyphemus (Arthropoda: Chelicerata).
Battelle BA, Ryan JF, Kempler KE, Saraf SR, Marten CE, Warren WC, Minx PJ, Montague MJ, Green PJ, Schmidt SA, Fulton L, Patel NH, Protas ME, Wilson RK, Porter ML. Battelle BA, et al. Among authors: porter ml. Genome Biol Evol. 2016 Jun 3;8(5):1571-89. doi: 10.1093/gbe/evw100. Genome Biol Evol. 2016. PMID: 27189985 Free PMC article.
206 results