R01 GM055479/GM/NIGMS NIH HHS/United States[Grants and Funding] - Search Results

Year	Number of Results
1999	1
2001	1
2003	1
2004	1
2005	1
2006	1
2007	5
2008	4
2009	8
2011	1
2012	4
2013	6
2014	1
2015	1
2016	3
2017	1
2019	1
2020	2
2021	5
2022	6
2023	5
2024	1

1

Systematic identification of genotype-dependent enhancer variants in eosinophilic esophagitis.

Shook MS, Lu X, Chen X, Parameswaran S, Edsall L, Trimarchi MP, Ernst K, Granitto M, Forney C, Donmez OA, Diouf AA, VonHandorf A, Rothenberg ME, Weirauch MT, Kottyan LC. Shook MS, et al. Am J Hum Genet. 2024 Feb 1;111(2):280-294. doi: 10.1016/j.ajhg.2023.12.008. Epub 2024 Jan 5. Am J Hum Genet. 2024. PMID: 38183988 Free PMC article.

2

After the Infection: A Survey of Pathogens and Non-communicable Human Disease.

Lape M, Schnell D, Parameswaran S, Ernst K, Salomonis N, Martin LJ, Harnett BM, Kottyan LC, Weirauch MT. Lape M, et al. medRxiv [Preprint]. 2023 Sep 14:2023.09.14.23295428. doi: 10.1101/2023.09.14.23295428. medRxiv. 2023. PMID: 37745430 Free PMC article. Preprint.

3

VExD: a curated resource for human gene expression alterations following viral infection.

Dexheimer PJ, Pujato M, Roskin KM, Weirauch MT. Dexheimer PJ, et al. G3 (Bethesda). 2023 Sep 30;13(10):jkad176. doi: 10.1093/g3journal/jkad176. G3 (Bethesda). 2023. PMID: 37531635 Free PMC article.

4

NOMe-HiC: joint profiling of genetic variant, DNA methylation, chromatin accessibility, and 3D genome in the same DNA molecule.

Fu H, Zheng H, Chen X, Weirauch MT, Muglia LJ, Wang L, Liu Y. Fu H, et al. Genome Biol. 2023 Mar 16;24(1):50. doi: 10.1186/s13059-023-02889-x. Genome Biol. 2023. PMID: 36927507 Free PMC article.

5

maxATAC: Genome-scale transcription-factor binding prediction from ATAC-seq with deep neural networks.

Cazares TA, Rizvi FW, Iyer B, Chen X, Kotliar M, Bejjani AT, Wayman JA, Donmez O, Wronowski B, Parameswaran S, Kottyan LC, Barski A, Weirauch MT, Prasath VBS, Miraldi ER. Cazares TA, et al. PLoS Comput Biol. 2023 Jan 31;19(1):e1010863. doi: 10.1371/journal.pcbi.1010863. eCollection 2023 Jan. PLoS Comput Biol. 2023. PMID: 36719906 Free PMC article.

6

Gene-environment interactions and their impact on human health.

Virolainen SJ, VonHandorf A, Viel KCMF, Weirauch MT, Kottyan LC. Virolainen SJ, et al. Genes Immun. 2023 Feb;24(1):1-11. doi: 10.1038/s41435-022-00192-6. Epub 2022 Dec 30. Genes Immun. 2023. PMID: 36585519 Free PMC article. Review.

7

Multiancestral polygenic risk score for pediatric asthma.

Namjou B, Lape M, Malolepsza E, DeVore SB, Weirauch MT, Dikilitas O, Jarvik GP, Kiryluk K, Kullo IJ, Liu C, Luo Y, Satterfield BA, Smoller JW, Walunas TL, Connolly J, Sleiman P, Mersha TB, Mentch FD, Hakonarson H, Prows CA, Biagini JM, Khurana Hershey GK, Martin LJ, Kottyan L; eMERGE Network. Namjou B, et al. J Allergy Clin Immunol. 2022 Nov;150(5):1086-1096. doi: 10.1016/j.jaci.2022.03.035. Epub 2022 May 18. J Allergy Clin Immunol. 2022. PMID: 35595084 Free PMC article.

8

Epigenetic and transcriptional dysregulation in CD4+ T cells in patients with atopic dermatitis.

Eapen AA, Parameswaran S, Forney C, Edsall LE, Miller D, Donmez O, Dunn K, Lu X, Granitto M, Rowden H, Magier AZ, Pujato M, Chen X, Kaufman K, Bernstein DI, Devonshire AL, Rothenberg ME, Weirauch MT, Kottyan LC. Eapen AA, et al. PLoS Genet. 2022 May 16;18(5):e1009973. doi: 10.1371/journal.pgen.1009973. eCollection 2022 May. PLoS Genet. 2022. PMID: 35576187 Free PMC article.

9

Definition of germ layer cell lineage alternative splicing programs reveals a critical role for Quaking in specifying cardiac cell fate.

Fagg WS, Liu N, Braunschweig U, Pereira de Castro KL, Chen X, Ditmars FS, Widen SG, Donohue JP, Modis K, Russell WK, Fair JH, Weirauch MT, Blencowe BJ, Garcia-Blanco MA. Fagg WS, et al. Nucleic Acids Res. 2022 May 20;50(9):5313-5334. doi: 10.1093/nar/gkac327. Nucleic Acids Res. 2022. PMID: 35544276 Free PMC article.

10

CASCADE: high-throughput characterization of regulatory complex binding altered by non-coding variants.

Bray D, Hook H, Zhao R, Keenan JL, Penvose A, Osayame Y, Mohaghegh N, Chen X, Parameswaran S, Kottyan LC, Weirauch MT, Siggers T. Bray D, et al. Cell Genom. 2022 Feb 9;2(2):100098. doi: 10.1016/j.xgen.2022.100098. Cell Genom. 2022. PMID: 35252945 Free PMC article.

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