R01-LM006845/LM/NLM NIH HHS/United States[Grants and Funding] - Search Results

Year	Number of Results
2000	2
2001	3
2002	2
2003	3
2004	7
2005	3
2006	5
2007	13
2008	14
2009	16
2010	19
2011	13
2012	1
2013	2
2024	0

1

EDGE-pro: Estimated Degree of Gene Expression in Prokaryotic Genomes.

Magoc T, Wood D, Salzberg SL. Magoc T, et al. Evol Bioinform Online. 2013;9:127-36. doi: 10.4137/EBO.S11250. Epub 2013 Mar 10. Evol Bioinform Online. 2013. PMID: 23531787 Free PMC article.

2

Hawkeye and AMOS: visualizing and assessing the quality of genome assemblies.

Schatz MC, Phillippy AM, Sommer DD, Delcher AL, Puiu D, Narzisi G, Salzberg SL, Pop M. Schatz MC, et al. Brief Bioinform. 2013 Mar;14(2):213-24. doi: 10.1093/bib/bbr074. Epub 2011 Dec 23. Brief Bioinform. 2013. PMID: 22199379 Free PMC article.

3

GAGE: A critical evaluation of genome assemblies and assembly algorithms.

Salzberg SL, Phillippy AM, Zimin A, Puiu D, Magoc T, Koren S, Treangen TJ, Schatz MC, Delcher AL, Roberts M, Marçais G, Pop M, Yorke JA. Salzberg SL, et al. Genome Res. 2012 Mar;22(3):557-67. doi: 10.1101/gr.131383.111. Epub 2012 Jan 6. Genome Res. 2012. PMID: 22147368 Free PMC article.

4

FLASH: fast length adjustment of short reads to improve genome assemblies.

Magoč T, Salzberg SL. Magoč T, et al. Bioinformatics. 2011 Nov 1;27(21):2957-63. doi: 10.1093/bioinformatics/btr507. Epub 2011 Sep 7. Bioinformatics. 2011. PMID: 21903629 Free PMC article.

5

TopHat-Fusion: an algorithm for discovery of novel fusion transcripts.

Kim D, Salzberg SL. Kim D, et al. Genome Biol. 2011 Aug 11;12(8):R72. doi: 10.1186/gb-2011-12-8-r72. Genome Biol. 2011. PMID: 21835007 Free PMC article.

6

Two new complete genome sequences offer insight into host and tissue specificity of plant pathogenic Xanthomonas spp.

Bogdanove AJ, Koebnik R, Lu H, Furutani A, Angiuoli SV, Patil PB, Van Sluys MA, Ryan RP, Meyer DF, Han SW, Aparna G, Rajaram M, Delcher AL, Phillippy AM, Puiu D, Schatz MC, Shumway M, Sommer DD, Trapnell C, Benahmed F, Dimitrov G, Madupu R, Radune D, Sullivan S, Jha G, Ishihara H, Lee SW, Pandey A, Sharma V, Sriariyanun M, Szurek B, Vera-Cruz CM, Dorman KS, Ronald PC, Verdier V, Dow JM, Sonti RV, Tsuge S, Brendel VP, Rabinowicz PD, Leach JE, White FF, Salzberg SL. Bogdanove AJ, et al. J Bacteriol. 2011 Oct;193(19):5450-64. doi: 10.1128/JB.05262-11. Epub 2011 Jul 22. J Bacteriol. 2011. PMID: 21784931 Free PMC article.

7

Genome assembly has a major impact on gene content: a comparison of annotation in two Bos taurus assemblies.

Florea L, Souvorov A, Kalbfleisch TS, Salzberg SL. Florea L, et al. PLoS One. 2011;6(6):e21400. doi: 10.1371/journal.pone.0021400. Epub 2011 Jun 22. PLoS One. 2011. PMID: 21731731 Free PMC article.

8

Detection of lineage-specific evolutionary changes among primate species.

Pertea M, Pertea GM, Salzberg SL. Pertea M, et al. BMC Bioinformatics. 2011 Jul 4;12:274. doi: 10.1186/1471-2105-12-274. BMC Bioinformatics. 2011. PMID: 21726447 Free PMC article.

9

Sim4db and Leaff: utilities for fast batch spliced alignment and sequence indexing.

Walenz B, Florea L. Walenz B, et al. Bioinformatics. 2011 Jul 1;27(13):1869-70. doi: 10.1093/bioinformatics/btr285. Epub 2011 May 6. Bioinformatics. 2011. PMID: 21551146 Free PMC article.

10

Sequence-based predictions of lipooligosaccharide diversity in the Neisseriaceae and their implication in pathogenicity.

Stein DC, Miller CJ, Bhoopalan SV, Sommer DD. Stein DC, et al. PLoS One. 2011 Apr 18;6(4):e18923. doi: 10.1371/journal.pone.0018923. PLoS One. 2011. PMID: 21533118 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My NCBI Filters

Results by year

Text availability

Article attribute

Article type

Publication date

97 results

Results by year

Search Page

Filters

My NCBI Filters

Results by year

Text availability

Article attribute

Article type

Publication date

Search Results

97 results

Results by year