Rohl CA - Search Results

1

Digital transcriptome profiling using selective hexamer priming for cDNA synthesis.

Armour CD, Castle JC, Chen R, Babak T, Loerch P, Jackson S, Shah JK, Dey J, Rohl CA, Johnson JM, Raymond CK. Armour CD, et al. Among authors: rohl ca. Nat Methods. 2009 Sep;6(9):647-9. doi: 10.1038/nmeth.1360. Epub 2009 Aug 9. Nat Methods. 2009. PMID: 19668204

2

DNA copy number, including telomeres and mitochondria, assayed using next-generation sequencing.

Castle JC, Biery M, Bouzek H, Xie T, Chen R, Misura K, Jackson S, Armour CD, Johnson JM, Rohl CA, Raymond CK. Castle JC, et al. Among authors: rohl ca. BMC Genomics. 2010 Apr 16;11:244. doi: 10.1186/1471-2164-11-244. BMC Genomics. 2010. PMID: 20398377 Free PMC article.

3

Genetic validation of whole-transcriptome sequencing for mapping expression affected by cis-regulatory variation.

Babak T, Garrett-Engele P, Armour CD, Raymond CK, Keller MP, Chen R, Rohl CA, Johnson JM, Attie AD, Fraser HB, Schadt EE. Babak T, et al. Among authors: rohl ca. BMC Genomics. 2010 Aug 13;11:473. doi: 10.1186/1471-2164-11-473. BMC Genomics. 2010. PMID: 20707912 Free PMC article.

4

A quantitative atlas of polyadenylation in five mammals.

Derti A, Garrett-Engele P, Macisaac KD, Stevens RC, Sriram S, Chen R, Rohl CA, Johnson JM, Babak T. Derti A, et al. Among authors: rohl ca. Genome Res. 2012 Jun;22(6):1173-83. doi: 10.1101/gr.132563.111. Epub 2012 Mar 27. Genome Res. 2012. PMID: 22454233 Free PMC article.

5

Definition, conservation and epigenetics of housekeeping and tissue-enriched genes.

She X, Rohl CA, Castle JC, Kulkarni AV, Johnson JM, Chen R. She X, et al. Among authors: rohl ca. BMC Genomics. 2009 Jun 17;10:269. doi: 10.1186/1471-2164-10-269. BMC Genomics. 2009. PMID: 19534766 Free PMC article.

6

Digital genome-wide ncRNA expression, including SnoRNAs, across 11 human tissues using polyA-neutral amplification.

Castle JC, Armour CD, Löwer M, Haynor D, Biery M, Bouzek H, Chen R, Jackson S, Johnson JM, Rohl CA, Raymond CK. Castle JC, et al. Among authors: rohl ca. PLoS One. 2010 Jul 26;5(7):e11779. doi: 10.1371/journal.pone.0011779. PLoS One. 2010. PMID: 20668672 Free PMC article.

7

Mapping the genetic architecture of gene expression in human liver.

Schadt EE, Molony C, Chudin E, Hao K, Yang X, Lum PY, Kasarskis A, Zhang B, Wang S, Suver C, Zhu J, Millstein J, Sieberts S, Lamb J, GuhaThakurta D, Derry J, Storey JD, Avila-Campillo I, Kruger MJ, Johnson JM, Rohl CA, van Nas A, Mehrabian M, Drake TA, Lusis AJ, Smith RC, Guengerich FP, Strom SC, Schuetz E, Rushmore TH, Ulrich R. Schadt EE, et al. Among authors: rohl ca. PLoS Biol. 2008 May 6;6(5):e107. doi: 10.1371/journal.pbio.0060107. PLoS Biol. 2008. PMID: 18462017 Free PMC article.

8

Knowledge based identification of essential signaling from genome-scale siRNA experiments.

Bankhead A 3rd, Sach I, Ni C, LeMeur N, Kruger M, Ferrer M, Gentleman R, Rohl C. Bankhead A 3rd, et al. BMC Syst Biol. 2009 Aug 5;3:80. doi: 10.1186/1752-0509-3-80. BMC Syst Biol. 2009. PMID: 19653913 Free PMC article.

9

Automated prediction of CASP-5 structures using the Robetta server.

Chivian D, Kim DE, Malmström L, Bradley P, Robertson T, Murphy P, Strauss CE, Bonneau R, Rohl CA, Baker D. Chivian D, et al. Among authors: rohl ca. Proteins. 2003;53 Suppl 6:524-33. doi: 10.1002/prot.10529. Proteins. 2003. PMID: 14579342

10

Physically realistic homology models built with ROSETTA can be more accurate than their templates.

Misura KM, Chivian D, Rohl CA, Kim DE, Baker D. Misura KM, et al. Among authors: rohl ca. Proc Natl Acad Sci U S A. 2006 Apr 4;103(14):5361-6. doi: 10.1073/pnas.0509355103. Epub 2006 Mar 27. Proc Natl Acad Sci U S A. 2006. PMID: 16567638 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My NCBI Filters

Text availability

Article attribute

Article type

Publication date

35 results

Search Page