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A new method for stranded whole transcriptome RNA-seq.
Miller DF, Yan PS, Buechlein A, Rodriguez BA, Yilmaz AS, Goel S, Lin H, Collins-Burow B, Rhodes LV, Braun C, Pradeep S, Rupaimoole R, Dalkilic M, Sood AK, Burow ME, Tang H, Huang TH, Liu Y, Rusch DB, Nephew KP. Miller DF, et al. Among authors: rusch db. Methods. 2013 Sep 15;63(2):126-34. doi: 10.1016/j.ymeth.2013.03.023. Epub 2013 Apr 1. Methods. 2013. PMID: 23557989 Free PMC article.
Stranded Whole Transcriptome RNA-Seq for All RNA Types.
Miller DFB, Yan PX, Fang F, Buechlein A, Ford JB, Tang H, Huang TH, Burow ME, Liu Y, Rusch DB, Nephew KP. Miller DFB, et al. Among authors: rusch db. Curr Protoc Hum Genet. 2015 Jan 20;84:11.14.1-11.14.23. doi: 10.1002/0471142905.hg1114s84. Curr Protoc Hum Genet. 2015. PMID: 25599667 Free PMC article.
Daphnia magna transcriptome by RNA-Seq across 12 environmental stressors.
Orsini L, Gilbert D, Podicheti R, Jansen M, Brown JB, Solari OS, Spanier KI, Colbourne JK, Rusch DB, Decaestecker E, Asselman J, De Schamphelaere KA, Ebert D, Haag CR, Kvist J, Laforsch C, Petrusek A, Beckerman AP, Little TJ, Chaturvedi A, Pfrender ME, De Meester L, Frilander MJ. Orsini L, et al. Among authors: rusch db. Sci Data. 2016 May 10;3:160030. doi: 10.1038/sdata.2016.30. Sci Data. 2016. PMID: 27164179 Free PMC article.
Complete Transcriptome RNA-Seq.
Miller DF, Yan P, Fang F, Buechlein A, Kroll K, Frankhouser D, Stump C, Stump P, Ford JB, Tang H, Michaels S, Matei D, Huang TH, Chien J, Liu Y, Rusch DB, Nephew KP. Miller DF, et al. Among authors: rusch db. Methods Mol Biol. 2017;1513:141-162. doi: 10.1007/978-1-4939-6539-7_10. Methods Mol Biol. 2017. PMID: 27807835
Early transcriptional response pathways in Daphnia magna are coordinated in networks of crustacean-specific genes.
Orsini L, Brown JB, Shams Solari O, Li D, He S, Podicheti R, Stoiber MH, Spanier KI, Gilbert D, Jansen M, Rusch DB, Pfrender ME, Colbourne JK, Frilander MJ, Kvist J, Decaestecker E, De Schamphelaere KAC, De Meester L. Orsini L, et al. Among authors: rusch db. Mol Ecol. 2018 Feb;27(4):886-897. doi: 10.1111/mec.14261. Epub 2017 Aug 19. Mol Ecol. 2018. PMID: 28746735 Free PMC article.
110 results